Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00669 AtgcaaaaattgttttattcatcatcttcatcatcaggGCCACCACCATCGTTGCAGATGCTGCCAATATTACCTCCTTTGCCGCCACGGACTTTGACTCCTCCACCAGCTCTTAGTCTAAATGACCAACAGTATCCTCTCCTGCATAGCATGGATGATGATGAGTTGTTCTGGCGAGCATTGTTGGttccaaagagaaagaagtttTCTGGTGAGCATGTGCCTAAGATAGCATTCATGTTCCTGACAAAGGGACCCTTACCTCTCTGTCCCCTGTGGGATATGTTCTTCAAAGGGCATGAAGGGCTTTATACCATCTATGTTCACACTCATCCTACGTATATTTGGTTAGTGCCAGAGGATTCTGTCTTCTATGGAAGAAGAATTCCAAGCAAGCCAGTTGAGTGGGGAAAACCCAGTATGATTGATGCAGAGAGGCGTCTATTAGCCAATGCTCTCCTTGACTTCTACAACGAGAGATTCGTGCTGCTCTCAGAGAGCTGCATTCCTCTATTCAACTTGACAACAATCTACAACTACTTGTTTGGCGTGAATCAAAGCTTTATAGCATCATACGATGACCCAAGAAAAGTTGGGCGTGGACGATACAACCCCAAGATGATGCCTGCAATAACCATCTCCGATTGGCGCAAAGGGTCTCAATGGTTTGAAGTGAACAGAAAGCTGGCCATTGAGATTGTATCAGACAAGAAATTCTACCCTATTTTCAGTGAACATTGCAGCCCCCCATGTTACATGGATGAGCACTATATACCCACACTTGTCAACATGTGTTGCTCAAAAGACAACCTAAATAGGAGCATAACATGGGTAGATTGGTCCAAGAGTGGTCCACACCCTGGAAGGTTTGGGAGATCTGCTGTCTCAGTTGAGTTTCTGAATCAAATAAGGTATAACTGTACTGGTATTCATGGTGCCAATTCAACCACTAGCTCTATGTGCTTTCTTTTTGCTAGGAAGTTTATGCCAGATACACTCAAGCCTTTGCTGCAGATTGCTTCTGTGTTTCTAGGCTA 1037 0.4243 MQKLFYSSSSSSGPPPSLQMLPILPPLPPRTLTPPPALSLNDQQYPLLHSMDDDELFWRALLVPKRKKFSGEHVPKIAFMFLTKGPLPLCPLWDMFFKGHEGLYTIYVHTHPTYIWLVPEDSVFYGRRIPSKPVEWGKPSMIDAERRLLANALLDFYNERFVLLSESCIPLFNLTTIYNYLFGVNQSFIASYDDPRKVGRGRYNPKMMPAITISDWRKGSQWFEVNRKLAIEIVSDKKFYPIFSEHCSPPCYMDEHYIPTLVNMCCSKDNLNRSITWVDWSKSGPHPGRFGRSAVSVEFLNQIRYNCTGIHGANSTTSSMCFLFARKFMPDTLKPLLQIASVFLG 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00669 345 Pfam Core-2/I-Branching enzyme 77 304 IPR003406 GO:0016020|GO:0016757
Bva03g00669 345 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN 38 344 - -
Bva03g00669 345 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 38 344 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00669 Bva-Chr3 4011341 4013204 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01813 03 16196879 16198672 Bva03g00669 03 4011341 4013204 ECH
Bva11g00734 11 10268084 10271213 Bva03g00669 03 4011341 4013204 ECH
Bva03g00669 03 4011341 4013204 Bva03g00669 03 4011341 4013204 ECH