Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00651 ATGAGAAACTTTTTGCAGCTTTTTTCCTCTGTGCTCTTTGGCCTCTTATTGTTCagcattttttgtttggtacaGACAAAATCTTTCATCGAACCATGTAGCTCCTCAGACTCATGCCCTGCTCTTCTCTCTTATCTTTTGCCTTGGGACTCCAAACTCTCTGAAATTGCGTCTCGTTTTCATGTAAATGTTTCTGATATCTTGGCTGCAAATTCTGTCTTCCCAATAGTATCATCACAAGATAATCAAATTATCTGGGCAAattcacttgtgaaaatacctATCTCGTGTTCTTGTGCGGAAGGTATCAGAAGATATATGGTGAACTATTACATTGTTCAACCAGCTGATACCCTTGAATCCATCTCTCAAGGTTATGGTGGGCTTGTTAGTGCAGAACAGATTATGAGTGTGAACAGTATCAATGCCACAAATCCATTGACAAATGGAGGGAGCTTGGTTATTCCATTGCCTTGTACCTGTTTGAATAATGTCAACAATGGGCAAACCACAGTTTATATGTCATATGTGGTGCAGGCAGGGGAGCTCTTCAACAGGATAGCTTCAGCCTTTGGTACTACTATTAATGAATTGGAGAATATTAATGGGCTACCCGAAGCATGGTTGACACAGGAGACATACTA 644 0.3835 MVNYYIVQPADTLESISQGYGGLVSAEQIMSVNSINATNPLTNGGSLVIPLPCTCLNNVNNGQTTVYMSYVVQAGELFNRIASAFGTTINELENINGLPEAWLTQETY 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00651 108 Gene3D LysM domain 59 104 IPR036779 -
Bva03g00651 108 ProSiteProfiles LysM domain profile. 68 108 IPR018392 -
Bva03g00651 108 SUPERFAMILY LysM domain 4 51 IPR036779 -
Bva03g00651 108 CDD LysM 4 49 IPR018392 -
Bva03g00651 108 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 1 2 100 - -
Bva03g00651 108 Gene3D LysM domain 3 58 IPR036779 -
Bva03g00651 108 SUPERFAMILY LysM domain 68 103 IPR036779 -
Bva03g00651 108 SMART LysM_2 4 50 IPR018392 -
Bva03g00651 108 SMART LysM_2 69 99 IPR018392 -
Bva03g00651 108 CDD LysM 69 105 IPR018392 -
Bva03g00651 108 Pfam LysM domain 70 98 IPR018392 -
Bva03g00651 108 Pfam LysM domain 5 50 IPR018392 -
Bva03g00651 108 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 2 100 - -
Bva03g00651 108 ProSiteProfiles LysM domain profile. 3 49 IPR018392 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g00651 4 98 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 47.917 4.75e-22 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g00651 - - aprc:113855794 139.043