Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02069 ATGTTCTTTGATTACTTATTATGTAAGCAAAATAATATGGATGTAGCTGCTAAAAGCACGGGGAAGTTACTGCAGAAAAAAAGGATCTTTGACAATGAAAATAAGGAGCAGCTGCAGACAAAGAAGGAGGTTGGATTTGTGAGTGCCATGGAAGGGATAGCTCCCAGTTCATGCACAAGGCCAGTTATGGAGAAGACCGCAAGGCCGCAGGAGCAGTTGAATTGTCCAAGGTGCAATTCAACCAACACAAAGTTTTGTTACTACAATAATTACAGCCTCACACAACCTAGATACTTCTGCAAGACTTGCAGAAGGTACTGGACAGAAGGAGGGTCTCTCAGAAATGTCCCTGTTGGAGGAGGTTcaagaaagaacaagaaggTTACTCcagcatcatcatcatcatcttcagcAGCAGCTTCATCAAAGGTTCCTGATCTTAACCCACCAAGCATTTCAACTATCTCATCCCAAAATCCTAAAATGCATGGAGGGCAAGACCTTAATCTGGCTTTCCCAGCTATGGACGAGTATCATGGTATGTCTCAGTATATTGAGATGCCAAAACTTGAAAACGGCAATTCTAGTCACCAAAGCCCTTCTTCTGCTCCAGCTTCACTTTCAGCTCTAGAGCTCCTAAGAAGTGGGATGGCTTCTAGGGGTTTGAATCCTTATATCCCCTCAATGATGCCAAACTCAAATACCCTTTATCCATCTGGGTTTCCCATGCAAGAAATTAAACCTAATCTTGGTTTTTCAGTCGATCAAGGGCTTGGAAACAGATCTGGGGTCCAAGAGAACAGTGGGAGGCTTTTGTTCCCATTTGGAGATATGAAGCAGCTTTCAGGTAATAATACTCAAGtggaacaaaataaagaacaagGAAATTCATCAACTGGGTATTGGACTGGGATGATTGGCGAAGGTTCAtggtg 935 0.4 MFFDYLLCKQNNMDVAAKSTGKLLQKKRIFDNENKEQLQTKKEVGFVSAMEGIAPSSCTRPVMEKTARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKVTPASSSSSSAAASSKVPDLNPPSISTISSQNPKMHGGQDLNLAFPAMDEYHGMSQYIEMPKLENGNSSHQSPSSAPASLSALELLRSGMASRGLNPYIPSMMPNSNTLYPSGFPMQEIKPNLGFSVDQGLGNRSGVQENSGRLLFPFGDMKQLSGNNTQVEQNKEQGNSSTGYWTGMIGEGSW 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02069 311 MobiDBLite consensus disorder prediction 126 164 - -
Bva02g02069 311 MobiDBLite consensus disorder prediction 114 168 - -
Bva02g02069 311 Pfam Dof domain, zinc finger 71 127 IPR003851 GO:0003677|GO:0006355
Bva02g02069 311 PANTHER DOF ZINC FINGER PROTEIN DOF3.7 58 306 - -
Bva02g02069 311 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 58 306 IPR045174 GO:0003700|GO:0006355
Bva02g02069 311 ProSitePatterns Zinc finger Dof-type signature. 75 111 IPR003851 GO:0003677|GO:0006355
Bva02g02069 311 ProSiteProfiles Zinc finger Dof-type profile. 73 127 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02069 Bva-Chr2 21493772 21496180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02069 65 311 C2C2-Dof Transcription Factor Family AT3G61850 52.381 6.39e-75 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bva02g02069 zf-Dof 3.7e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02069 - - qsu:111983239 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02069 02 21493772 21496180 Bva12g01922 12 15335757 15337921 ECH
Bva02g02069 02 21493772 21496180 Bva06g02999 06 18670090 18672292 ECH
Bva02g02069 02 21493772 21496180 Bva02g02069 02 21493772 21496180 ECH
Bva02g02069 02 21493772 21496180 Bva08g01948 08 13078505 13080418 ECH