Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g01329 ATGGTTTTTTCCTCCATCCCAGCTTATCTTGATCCAGCCAACTGGCAACAACAGCAACTGAGTCATCAAACCGGTGGAAGCAGCAGCCCAGGTTCTCAGCTTATTCCCCCACCACCGCCACCGGCACCACCCACGCAACCTCATGGTGCTGGTGGCACGGGCTCCATCAGGCCGGGGTCTATGGCTGATCAAGCCCGTATGGCTAACATACCTATGCCAGAGACTGCACTAAAATGCCCACGATGCGAATCCACAAACACCAAGTTTTGCTACTTCAACAACTACAGCCTCTCGCAGCCCCGGCACTTCTGCAAGACCTGCAGAAGGTACTGGACAAGAAACGGGGCCTTGAGAAATGTGCCGGTTGGTGGCGGCTGCCGGAGGAACAAGAGAACCAAAGGAAGTAGCAGCTCAAAGTCTCCGGTGAGCTCGGATCGCCAAACGGGTAGCGCTAGTTCAACGAACTCAGTCTCTTCTAACAGTGGTTCTGCTGCTGATATAGTTGGCCTCGGACCTCAGGTTCCACCACTCAGGTTCATGGCCCCACTACATCAACTAACAGATTTTGCTGCTGGAGACATTGCCTTAAACTACGGCCTCAATTACAGCGCAATCTCAGCACCAATGGGGGGAGTAGGTgacttaaattttcatataggTGGTGCTTTGGGAGGAGCAAGTGGCAGCAACGGCGGTTCTATCTTCTCAGCAGCTGGATTGGAACAATGGCGGGTGCCACAAACACAGCAATTTCCATTTTTGGCTGGTTTGGAAGCTTCACATGGGTTGTACCAACTTGAAGCAGGTGGCGCCGAGGGCGGGGGATATGGTGGTGCTGGTGGTGGCGCGGCTCAGGTCAAGCCGAAGGCGACTACTTCCGGGCTGATAACTCAGATGGCTTCAGTGAAAATGGAAGACAATCAGGAACTGAATTTGTCAAGGCAGTTCTTGGGAATCAATATTCCAGGTAGTGAGCAATATTGGGGTACTACTGCTGGTGCTACTGCAGCATGGACAGATCTTTCTGGGTTTAGTTCTTCCTCCACTACTAGCAATCAATTATA 1064 0.515 MVFSSIPAYLDPANWQQQQLSHQTGGSSSPGSQLIPPPPPPAPPTQPHGAGGTGSIRPGSMADQARMANIPMPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRNGALRNVPVGGGCRRNKRTKGSSSSKSPVSSDRQTGSASSTNSVSSNSGSAADIVGLGPQVPPLRFMAPLHQLTDFAAGDIALNYGLNYSAISAPMGGVGDLNFHIGGALGGASGSNGGSIFSAAGLEQWRVPQTQQFPFLAGLEASHGLYQLEAGGAEGGGYGGAGGGAAQVKPKATTSGLITQMASVKMEDNQELNLSRQFLGINIPGSEQYWGTTAGATAAWTDLSGFSSSSTTSNQL 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g01329 354 MobiDBLite consensus disorder prediction 16 31 - -
Bva02g01329 354 MobiDBLite consensus disorder prediction 32 47 - -
Bva02g01329 354 Pfam Dof domain, zinc finger 76 131 IPR003851 GO:0003677|GO:0006355
Bva02g01329 354 MobiDBLite consensus disorder prediction 135 164 - -
Bva02g01329 354 PANTHER DOF ZINC FINGER PROTEIN DOF3.6 4 350 - -
Bva02g01329 354 MobiDBLite consensus disorder prediction 16 60 - -
Bva02g01329 354 MobiDBLite consensus disorder prediction 121 164 - -
Bva02g01329 354 ProSiteProfiles Zinc finger Dof-type profile. 77 131 IPR003851 GO:0003677|GO:0006355
Bva02g01329 354 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 4 350 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g01329 Bva-Chr2 17088344 17090090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g01329 1 328 C2C2-Dof Transcription Factor Family AT5G02460 38.945 1.28e-59 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bva02g01329 zf-Dof 4.5e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g01329 - - jre:108999004 381.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g01329 02 17088344 17090090 Bva02g01329 02 17088344 17090090 ECH
Bva01g00484 01 3814383 3816110 Bva02g01329 02 17088344 17090090 PCT