Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01905 ATGGAATCTTGGAGTTACACCCCAGAAGAGAAAAGCTATTTGTTTTCTGAGGAAATGGACTTTTCACTTGATGCTTTTCTGAGAACTAGAAAAGCAATGGTTGAATGGGACAATAAGGCCTCCTGTAACTTTGAAAAGGATGGATTTATTTCAGATATAGAAGTAGTTAAAAGCATGGAATTCGTGGACTTGGGATTTCCTGATCTGTTCCGAAAATCTTTTCATGGTAGCCAGCCACTGGAGACATCTAGCTGTGACCTAGACAATAATTCTAGTAAAATAGTGAATTCCTCTACTCAGGTTGTTGCTTTGGATTCATCTTTGGGTGAAGAAGAATCTGAGTCAAAGCATTCCAGTCCTCTAGTTGAATCTAAAAGTCACGATTCATCACTGATTGACCTGAAGCTAGGAAGATTAGCAGACTGTAAAAATGCAAGTAGTGatgaaattgtaaaagaagGACTAGCTTTATCCTCTATACCTCCAAGGGCACTTGCAAAGAGAGCTCGCACTTCTAGCTCACCTACACAGAAACCTTTATGTCAAGTTTATGGTTGCAATATGGATCTTAGCTCCTCAAAGGAGTACCACAAAAGGCATAAAGTTTGCGATGTTCACTCCAAGACAGCCAGAGTTATTGTTAATGGCATTGAACAGAGGTTTTGTCAGCAGTGTAGCAGGTTCCATTTGCTATCTGAGTTTGATGATGGTAAGCGTAGCTGTCGCAGACGCCTAGCAGGCCATAATGAACGCAGAAGGAAACCTCAGTTTGATTACATCTCTGGTAAACCGTACAAGATGCTTCAATCATATCAAGGTGCCAACTATCTCGGGGCTTCATTGCAGAAGAGGCCCCAGTTTGCCTTTCAAGATATATTTCGAAGTGGCATTTTGTACCCAGGGAAGTATGGACAAACCAATCATGGTGAACATATCAAAGTGGAAGAGGAACCATTTTACAGTCCTCAACTAGCAGTATCAATCACACACAGTCAGGAGTTATCCAACCCGAGCTGTGCTCTCTCTCTTCTGTCAGCTCAGACACAAGATCTGCTGCGCCCCGCTGTGGGGAACTCAATGGCTACTTCCCTAATTTTCCAGGGAATCTGCTCAAGCCACAATGACAGCCAAGTTTCTGAAATACCATTGGGGATAAGTTCCATGGATAAATATGGTCAAAATGAGTCCTTTTCATGTGGGGTAAACTCAATGGATGTTAAGAATGGAGCAGTACTGCTTTCTGAGGCTGGTCATTCTCAATCATCAGACTCATCAAGTGTCAAATATCATTTCACCCCCGAACATGGAACCACTGTTGATCTGTTCCAATTGTCATCACATCTCCAAAGGGTGGAGCAACAAAGAAATACTTTCTCTGTAAAGCGGCAAAATGAGGACTGCTGTTTCCCAACTGTGTA 1418 0.4189 MESWSYTPEEKSYLFSEEMDFSLDAFLRTRKAMVEWDNKASCNFEKDGFISDIEVVKSMEFVDLGFPDLFRKSFHGSQPLETSSCDLDNNSSKIVNSSTQVVALDSSLGEEESESKHSSPLVESKSHDSSLIDLKLGRLADCKNASSDEIVKEGLALSSIPPRALAKRARTSSSPTQKPLCQVYGCNMDLSSSKEYHKRHKVCDVHSKTARVIVNGIEQRFCQQCSRFHLLSEFDDGKRSCRRRLAGHNERRRKPQFDYISGKPYKMLQSYQGANYLGASLQKRPQFAFQDIFRSGILYPGKYGQTNHGEHIKVEEEPFYSPQLAVSITHSQELSNPSCALSLLSAQTQDLLRPAVGNSMATSLIFQGICSSHNDSQVSEIPLGISSMDKYGQNESFSCGVNSMDVKNGAVLLSEAGHSQSSDSSSVKYHFTPEHGTTVDLFQLSSHLQRVEQQRNTFSVKRQNEDCCFPTV 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01905 472 MobiDBLite consensus disorder prediction 105 124 - -
Bva01g01905 472 SUPERFAMILY SBT domain 179 260 IPR036893 GO:0003677|GO:0005634
Bva01g01905 472 Pfam SBP domain 181 254 IPR004333 GO:0003677
Bva01g01905 472 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 44 453 IPR044817 GO:0003677
Bva01g01905 472 Gene3D - 171 242 IPR036893 GO:0003677|GO:0005634
Bva01g01905 472 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 44 453 - -
Bva01g01905 472 MobiDBLite consensus disorder prediction 109 124 - -
Bva01g01905 472 ProSiteProfiles Zinc finger SBP-type profile. 178 255 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01905 Bva-Chr1 19358401 19363253 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Bva01g01905 SBP 1.7e-31 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01905 01 19358401 19363253 Bva01g01905 01 19358401 19363253 ECH