Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01814 ATGTCAGCGACGTCACCGTCTCCGGCGTCTACAGGCGCCGCATCACCACCGACCCCGTCAAATAGTAGTACCCCACCGCCCTCCATCACCAGTCCACCACCGCAAGCCTCGTCTCTACCACCGGATAACTCAACTTCACCTCCTTCACAGCCCAATGCGGATCCTGAAGCACCTCCAACAGCTTCAACACCAAACCCAACTCCGGCCACTCCATCAGCTCCTCCTCCTACTGTGCCATCACCTCCACCATCACAACCACCTCTGGCATCAACACCTCCTCCTTCTGGGAGTTCACCCCTATTGTCACCTACAGTAGCTCCACCTCCTCCACTCCCACAAACAGTTTCCCCTAcatcaccaccaccacctcctCCATCTAATACTCAACCATCATCTTCCCCTGTACCTCCATCAAAGCCGCCACCACCACCAGTGGTTTCACCAGAAAGTTCACCCCCGCCTCCACCGCCAACAAATTCATCAGTGCCACCCCCATCTAGTCAGCCAGTGCCTTCCCCTCCAACAtcatcaccaccaccaccatcaaGTCCACCTCAAAATTCACCGCCACCAGCATCACCGCCACCACCCAGGAATTCTCCCCCACCACCAGCATCAGTGCCACCACCCAGCGACTCACCACCGCCTTCAGTATCAGCGCCACCACCCAAGAATTCACCCCCACCACCAGCAGCTGTGCCTCCTCGGAGTTCATCTCCACCACCAGCATCAGCCCCTCATCCAAACTCACCACCCCCTCCAGCACCTAGACCTCCAAGTAGTTCGCCCCCTCCTCCTAGGACAACTCCACCTACTCCATCTCCTCCACCACCAGTGATACGATTGGCTCCCCCTCCACCCTCACGTGCTTTAGAAGGACCTTCTCAGACTCCCGCCCGACCATCAACAAATGGAGAGGGAAGTTCAAATTCCAGTGGCATTGGTATTGGTGGCATAGTAGCTATTGCTGTAGTGGCAGGAATTTTAGCATTTGTCTTCATTGGATTTGCTATCTGGTGCTTGAGGAGGCAAAGGAAAAAGCCACCAGGTAATGGTGGCTACGTCATGCCATCTGCTCTTGCCTCTTCACCTGAATCAGATTCATCTTTTTTTAAGACACATTCTTCAGCTCCTCTTGTACAAAGTGGTTCTGGCAGTGAAACTGGCTACAATTCTGTGTATACACCATCCGAGCCTGGTGGACTAGGGAACTCAAGGTCATGGTTTACTTATGAAGAGCTAGTTAAGGCAACAAATGGCTTTTCATCCCAAAATCTTCTGGGTGAGGGTGGATTTGGTTCGGTATATAAGGGATGTCTGCCTGATGGGAGAGAGATAGCAGTAAAACAGCTGAAAATTGGAGGAGGTcaaggagagagagaatttaAAGCTGAGGTGGAGATTATTAGTCGTATACACCATCGTCATTTAGTTTCTTTGGTGGGATACTGCATTTCGGATGAGAGAAGGTTGCTTGTCTATGACTATGTCCCTAACAATACCCTTTATTTCCATCTCCATGGGCAAGCTAATCCAGTACTGGACTGGGAAAAGCGTGTTAAAATTGCTGCTGGTGCTGCTCGAGGAATTGCTTATCTCCATGAAGACTGCAATCCTCGGATTATTCACCGGGATATAAAGTCATCTAACATTCTTTTAGAttacaactttgaagctcgagtCTCGGACTTTGGGCTCGCCAAATTAGCTCTTGATGCAAACACACACATAAGTACCCGAGTCATAGGAACTTTTGGATATGTTGCCCCTGAATATGCGTCAAGTGGCAAACTGACGGAGAAGTCtgatgtattttcttttggagtcGTTCTTTTGGAGCTAATCACTGGAAGGAAGCCAGTAGATGCATCTCAACCCTTAGGAGATGAGAGTCTAGTTGAATGGGCTCGACCTTTACTGAGACACGCACTTGAAAATGAGGAATTTGACAATTTGACAGATCCAAGGCTAGAAAAGAATTATGTTGACAGTGAAATGCTTCGCATGATTGAAGTTGCCGCAGCTTGTGTGCGGCATTCATCTGCCAAGAGGCCTACAATGGGACAGGTTGTTAGAGCTTTTGAAAGCTTAGTTGCTTCAGATCTAACCAATGGAATAAGGCCAGGGCAAAGTGAGGTATTTGACTCTGCACTGCAATCTGCAGAAATAGGATGGTTTCGGAGGATGGCATTTGGTAACCAAGATTTTAGCACAGACTATTTTAGCAACACAAGTCTGAATACCTA 2246 0.4715 MSATSPSPASTGAASPPTPSNSSTPPPSITSPPPQASSLPPDNSTSPPSQPNADPEAPPTASTPNPTPATPSAPPPTVPSPPPSQPPLASTPPPSGSSPLLSPTVAPPPPLPQTVSPTSPPPPPPSNTQPSSSPVPPSKPPPPPVVSPESSPPPPPPTNSSVPPPSSQPVPSPPTSSPPPPSSPPQNSPPPASPPPPRNSPPPPASVPPPSDSPPPSVSAPPPKNSPPPPAAVPPRSSSPPPASAPHPNSPPPPAPRPPSSSPPPPRTTPPTPSPPPPVIRLAPPPPSRALEGPSQTPARPSTNGEGSSNSSGIGIGGIVAIAVVAGILAFVFIGFAIWCLRRQRKKPPGNGGYVMPSALASSPESDSSFFKTHSSAPLVQSGSGSETGYNSVYTPSEPGGLGNSRSWFTYEELVKATNGFSSQNLLGEGGFGSVYKGCLPDGREIAVKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCISDERRLLVYDYVPNNTLYFHLHGQANPVLDWEKRVKIAAGAARGIAYLHEDCNPRIIHRDIKSSNILLDYNFEARVSDFGLAKLALDANTHISTRVIGTFGYVAPEYASSGKLTEKSDVFSFGVVLLELITGRKPVDASQPLGDESLVEWARPLLRHALENEEFDNLTDPRLEKNYVDSEMLRMIEVAAACVRHSSAKRPTMGQVVRAFESLVASDLTNGIRPGQSEVFDSALQSAEIGWFRRMAFGNQDFSTDYFSNTSLNT 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01814 748 CDD STKc_IRAK 427 697 - -
Bva01g01814 748 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 144 742 - -
Bva01g01814 748 MobiDBLite consensus disorder prediction 295 311 - -
Bva01g01814 748 MobiDBLite consensus disorder prediction 19 292 - -
Bva01g01814 748 ProSitePatterns Serine/Threonine protein kinases active-site signature. 541 553 IPR008271 GO:0004672|GO:0006468
Bva01g01814 748 MobiDBLite consensus disorder prediction 1 311 - -
Bva01g01814 748 ProSitePatterns Protein kinases ATP-binding region signature. 427 449 IPR017441 GO:0005524
Bva01g01814 748 MobiDBLite consensus disorder prediction 365 397 - -
Bva01g01814 748 ProSiteProfiles Protein kinase domain profile. 421 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01814 748 Gene3D Transferase(Phosphotransferase) domain 1 497 707 - -
Bva01g01814 748 MobiDBLite consensus disorder prediction 1 18 - -
Bva01g01814 748 SMART serkin_6 421 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01814 748 SUPERFAMILY Protein kinase-like (PK-like) 398 693 IPR011009 -
Bva01g01814 748 PANTHER BNACNNG34790D PROTEIN 144 742 - -
Bva01g01814 748 Pfam Protein tyrosine and serine/threonine kinase 424 693 IPR001245 GO:0004672|GO:0006468
Bva01g01814 748 Gene3D Phosphorylase Kinase; domain 1 398 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01814 Bva-Chr1 18813655 18819293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01814 219 744 Trihelix Transcription Factor Family AT5G38560 58.178 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Bva01g01814 PK_Tyr_Ser-Thr 7.5e-45 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01814 01 18813655 18819293 Bva01g01814 01 18813655 18819293 ECH