Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01804 ATGATGCCCCCTGCGCAAGAAACCACTATCACCACTGTTACACCGAACAATATTCCGGTCACAAACCGGCCGGAAAATAGCTTGGTTCACGCCGAACCGCCAGGTTCCGGCTCGAGTGAAGTAAAACCCACTTTGGATAATGACATTCCTCTACAACAACAGCCAGCAGCAGCAAGATTTTCCAATGTTCTTCAACAATCCTTGAAGCCAGTTACCCTCAagTTTGAGGACGTTTGTTATAGTATAACAtttcaaagtaaaaagaaTGGCGGTGGTTGTTATTGTTTATCTTCACAAGAGCCAAAGCTTACCCGGAATATACTCAACGGCGTGACGGGTATTGTCCGGTCCGGCGAGTTGATGGCAATGCTGGGGCCCTCCGGGAGCGGCAAGACTACCTTGCTCACTGCCCTCGCAGGCCGCCTTGCCGGAAAAGTGACCGGTACCATAACATATAATGGCCAACCTTTCTCTAGCTCCATGAAGCGCAAGATTGGTTTTGTGTCACAAGACGATGTCTTGTATCCTCACCTCACTGTTCTCGAGACTTTAACTTATGCTGCTCTGTTGAGACTTCCCAAGACTCTCACTACACAGGAGAAACTGGAGCAAGCTGAGATGATCATTCTCGAGCTTGGATTAACGCGCTGCCGGAACAGTGCTGTTGGTGGCGGCACGGCCATGTTTCGGGGCATTTCCGGTGGGGAGCGCAAACGGGTCAGTATCGGGCAGGAGATGTTGATCAACCCGAGTCTCTTGTTGCTGGATGAACCGACCTCCGGCCTTGACTCCACAACCGCTCAACGTATTGTGTCGATGTTACGGGGGCTGGCCCTTGGCGGCCGGACGGTGGTGACAACTATTCATCAACCTTCTAGCCGGTTGTATAGGATGTTTGATAAGGTGGTGGTATTATCCGATGGGTACCCGATTTACAGCGGGCAGGCAGGTCGGGTCATGGATTATCTTGGGTCCGTTGGATATGTGCCCGCTTTCAATTTCATGAACCCGGCAGATTTTCTTCTTGACCTTGCTAACGGCATTGTAGCTGATGTTAAACAGGATGATCATACAGATTTACATGGCAGATTAAACCACCATGAGGATCAAGCTTCAGTTAAACAATCACTTGTGTCATCCTACAAAAAGCACTTATATCCTGCTCTGAAAGAAGCGGTTCAGAGAAACAATAGAGACCCATCTGTTAATACATCTAGAACACCCAGAAGTTCGGAGAATCAATGGACCACAAGCTGGAGGGAACAATTCATGGTTCTGCTCAAAAGGGGTTTACAGGAGAGGAGACATGAATCTTATTCAGGCTTGAGGATTTTCCAAGTCTTGTCTGTTTCTATTCTCTCTGGGCTTCTATGGTGGAATTCTGATCCTTCACACATACAAGATCAGGTAggccttcttttcttcttctccatatTCTGGGGATTCTTCCCTCTTTTCAACGCCATCTTCACGTTTCCTCTGGAGAGGCCAATgctgaaaaaagagagatcaTCAGGCATGTACCATCTGTCCTCCTACTACGTTGCGCGGATGGTTGGAGATTTACCAATGGAGCTAGTCCTTCCTACTATCTTCGTAACAATCGCCTATTGGATGGGTGGTCTCAAGCCTTCAGTAGTTACATTTTTGTTAACGCTCTTGATCATCCTTCTTAATGTACTTGTCTCACAAGGAATAGGCCTAGCACTTGGTGCCATTCTAATGAATGTGAAGCAGGCTACAACCCTAGCTTCAGTAACCATGCTGGTTTTTCTCTTGGCTGGTGGATACTACATTCAGCAAATGCCAGCTTTCATAGCTTGGTTAAAGTACATTTCTTTCAGCCACTACTGCTATAAGCTTCTGGTTGGAGTGCAGTATTCAGTAAATGAGGTTTATGAATGTGGGTTAAGGCAACATTGTAGGACAATGGACTTTCCTGCTTTGAAGTATCTGGGGTTAGGGAATTTGTGGGCAGATGTGGCTGCATTGACTATAATGTTGGTAGGATACAGAGTTGTGGCCTATGTAGCTTTGAGGATGGTGCAGCTTCACTG 2057 0.4589 MMPPAQETTITTVTPNNIPVTNRPENSLVHAEPPGSGSSEVKPTLDNDIPLQQQPAAARFSNVLQQSLKPVTLKFEDVCYSITFQSKKNGGGCYCLSSQEPKLTRNILNGVTGIVRSGELMAMLGPSGSGKTTLLTALAGRLAGKVTGTITYNGQPFSSSMKRKIGFVSQDDVLYPHLTVLETLTYAALLRLPKTLTTQEKLEQAEMIILELGLTRCRNSAVGGGTAMFRGISGGERKRVSIGQEMLINPSLLLLDEPTSGLDSTTAQRIVSMLRGLALGGRTVVTTIHQPSSRLYRMFDKVVVLSDGYPIYSGQAGRVMDYLGSVGYVPAFNFMNPADFLLDLANGIVADVKQDDHTDLHGRLNHHEDQASVKQSLVSSYKKHLYPALKEAVQRNNRDPSVNTSRTPRSSENQWTTSWREQFMVLLKRGLQERRHESYSGLRIFQVLSVSILSGLLWWNSDPSHIQDQVGLLFFFSIFWGFFPLFNAIFTFPLERPMLKKERSSGMYHLSSYYVARMVGDLPMELVLPTIFVTIAYWMGGLKPSVVTFLLTLLIILLNVLVSQGIGLALGAILMNVKQATTLASVTMLVFLLAGGYYIQQMPAFIAWLKYISFSHYCYKLLVGVQYSVNEVYECGLRQHCRTMDFPALKYLGLGNLWADVAALTIMLVGYRVVAYVALRMVQLH 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01804 685 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 43 682 - -
Bva01g01804 685 MobiDBLite consensus disorder prediction 395 414 - -
Bva01g01804 685 MobiDBLite consensus disorder prediction 1 47 - -
Bva01g01804 685 MobiDBLite consensus disorder prediction 396 414 - -
Bva01g01804 685 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 73 332 IPR003439 GO:0005524
Bva01g01804 685 Pfam ABC transporter 108 260 IPR003439 GO:0005524
Bva01g01804 685 Gene3D - 96 326 IPR027417 -
Bva01g01804 685 MobiDBLite consensus disorder prediction 1 24 - -
Bva01g01804 685 Pfam ABC-2 type transporter 289 355 IPR043926 GO:0140359
Bva01g01804 685 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 105 325 IPR027417 -
Bva01g01804 685 SMART AAA_5 117 310 IPR003593 -
Bva01g01804 685 Pfam ABC-2 type transporter 421 627 IPR013525 GO:0016020|GO:0140359
Bva01g01804 685 CDD ABCG_EPDR 70 314 - -
Bva01g01804 685 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 43 682 - -
Bva01g01804 685 ProSitePatterns ABC transporters family signature. 232 246 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01804 Bva-Chr1 18746779 18750962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01804 106 308 Calmodulin-binding Proteins AT2G36910 31.455 2.79e-14 75.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01804 01 18746779 18750962 Bva01g01804 01 18746779 18750962 ECH