Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01797 ATGGCCTCAGTCTCCGACACTGCTTCTAGATCAACTAGTTCAGCAGCCGATTCTTACATAGGCAGCTTAATAAGCTTGACTTCCAAGAGCGAGATCAGATATGAAGGTGTTCTATACAACATCAACACCGAAGAGTCCAGTATTGGCCTCAGAAACGTACGGTCTTTTGGAAccgaaggaagaaaaaaggatgGGCCACAAATTCCTCCAGGTGACAAGGTGTATGAGTATATACTGTTCCGCGGGAGTGACATCAAGGATTTACAGGTGAAATCTTCACCACCTGCCCAGCCCACTCCACCAATAAACAATGATCCAGCAATTATTCAGTCACACTATCCTCGGCCAGTAACCACATCTACCAGCTTGCCTTCTGCTGTAAGTGGTCCAATGACTGATCTCAGTTCCCACAACCCACAACTTGGACTTCCAGGGTCAAATTTTCAGGGTCCCTTGCCCTTGTATCAACCTGGTGGAAACATAGGGTCATGGGGAGCTTCCCCATCTGCCCCAAGTGCGAATGGTGGCGGGCTAGCTATGCCAATGTATTGGCAAGGATATTATGGTGCTCCAAATGGGCTTCCTCAACTACATCAGCAATCTTTGCTTCGACCACCACCTGGCTTATCAATGCCTTCATCTATGCAGCAGCCAATGCAATACCCCAATTTCAATACCCCCATACCAGCTGGATCTGCAAATTTGCCAGAATTCCCATCACCTGTGGTCCCTGCTAGTACAAGTTCTCCTAGTTTAACTTCCACTTCTATACCACCTTCTAATCTGCCATCAACATTGCCTCCAGTACCCTCTGCTACCTTGGCTTCTGAAACCTTGCCAGCATCACTACCAAGCAAGGCACCAACAGTTTCACTTCCAGCTCCCACGCTAGCTGCTAACATGCCATCATTCTCTCCTTTGATCACTTCCAGTGATATAAATGCTATATTACCTCCAATCTCCAATAAACCTAATGCTATTCCTATTCCAGCTTCAAGCTTGCCTTTTCAGACTGTATCTCAATCAACTCCTGTTGTTGTTGGGTCATCAAATTCTGTGCGCAATGAAACACCAGCTCCTTCCCTGGTAACCCCAGGTCAATTGTTGCAGTCTGGACCAACCATTGCTTCTTCATCCCAACCATCGCAGACACCCTCTCATAAGGATGTTGAAATGGTTCAGGGATCATCATCAGCACCACCTGAACCATCTGTGCCTATTTCGGCTGAATCACAGCCGCCTATACTGCCATTGCCTGTAACCTCACGGCCCAGCCACAGGTCTAACGGAGCACCAGTCCAAACGCATCATGGTTATGGTTACCGGGGTCGTGGAAGGGGACAAGGGATTGCGAGTTCACGTCCAGTCACAAAATTCACTGAAGATTTTGATTTCACGGCAATGAATGAGAAGTTTAAAAAGGATGAAGTATGGGGCCATCTTGGTAAAAGTAACAAGTctcattcaaaagaaaaagacggAGATGAAAATATTAGTGATGAAGATGATATTCAAGATGAAGATAATGGTGAAGTATCAAAATCTGAGTCCAAGCCTGTCTATAATAAGGATGATTTCTTCGACACCCTCTCTTGCAATGCACTTGATGATTCACAGAATGGAAGGACTAGATACTCTGAGCAAATCAAGATAGATGCTGAGACATTTGGTGATTTTATGAGGCATCGTGGTGGCCGGGGCGGCCGTGGTCCTTGGCGTGGTGGACGTTCTCGTGGCGGTTATTATGGAAGAGGAGATTACGGAAGAGGAGGGTATGGCTATTCTGGAAGGGGACGAGGTCGGGGCATGTCCGGTTACACTTCATA 1826 0.4578 MASVSDTASRSTSSAADSYIGSLISLTSKSEIRYEGVLYNINTEESSIGLRNVRSFGTEGRKKDGPQIPPGDKVYEYILFRGSDIKDLQVKSSPPAQPTPPINNDPAIIQSHYPRPVTTSTSLPSAVSGPMTDLSSHNPQLGLPGSNFQGPLPLYQPGGNIGSWGASPSAPSANGGGLAMPMYWQGYYGAPNGLPQLHQQSLLRPPPGLSMPSSMQQPMQYPNFNTPIPAGSANLPEFPSPVVPASTSSPSLTSTSIPPSNLPSTLPPVPSATLASETLPASLPSKAPTVSLPAPTLAANMPSFSPLITSSDINAILPPISNKPNAIPIPASSLPFQTVSQSTPVVVGSSNSVRNETPAPSLVTPGQLLQSGPTIASSSQPSQTPSHKDVEMVQGSSSAPPEPSVPISAESQPPILPLPVTSRPSHRSNGAPVQTHHGYGYRGRGRGQGIASSRPVTKFTEDFDFTAMNEKFKKDEVWGHLGKSNKSHSKEKDGDENISDEDDIQDEDNGEVSKSESKPVYNKDDFFDTLSCNALDDSQNGRTRYSEQIKIDAETFGDFMRHRGGRGGRGPWRGGRSRGGYYGRGDYGRGGYGYSGRGRGRGMSGYTS 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01797 608 MobiDBLite consensus disorder prediction 340 456 - -
Bva01g01797 608 SMART LSM14_2 13 113 IPR025609 -
Bva01g01797 608 ProSiteProfiles TFG box profile. 540 560 IPR025768 -
Bva01g01797 608 MobiDBLite consensus disorder prediction 474 495 - -
Bva01g01797 608 CDD LSm14_N 16 90 IPR025609 -
Bva01g01797 608 MobiDBLite consensus disorder prediction 406 420 - -
Bva01g01797 608 Gene3D - 10 94 - -
Bva01g01797 608 ProSiteProfiles DFDF domain profile. 451 487 IPR025762 -
Bva01g01797 608 MobiDBLite consensus disorder prediction 113 133 - -
Bva01g01797 608 PANTHER SCD6 PROTEIN-RELATED 1 601 - -
Bva01g01797 608 MobiDBLite consensus disorder prediction 242 260 - -
Bva01g01797 608 MobiDBLite consensus disorder prediction 562 608 - -
Bva01g01797 608 SUPERFAMILY Sm-like ribonucleoproteins 18 95 IPR010920 -
Bva01g01797 608 MobiDBLite consensus disorder prediction 242 272 - -
Bva01g01797 608 MobiDBLite consensus disorder prediction 340 405 - -
Bva01g01797 608 Pfam FDF domain 458 557 IPR019050 -
Bva01g01797 608 MobiDBLite consensus disorder prediction 88 133 - -
Bva01g01797 608 MobiDBLite consensus disorder prediction 474 524 - -
Bva01g01797 608 PANTHER PROTEIN DECAPPING 5-LIKE 1 601 - -
Bva01g01797 608 SMART FDF_2 457 560 IPR019050 -
Bva01g01797 608 Pfam Scd6-like Sm domain 19 92 IPR025609 -
Bva01g01797 608 ProSiteProfiles FFD box profile. 519 534 IPR025761 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01797 Bva-Chr1 18678737 18683295 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01797 01 18678737 18683295 Bva01g01797 01 18678737 18683295 ECH