Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01789 ATGAAAGAAGAGGATCAAGGACAGTGTTCTTCACAAGCCATCAATAACTTTCAAAGCTATCAAGAGCAGCTACTTCTTCAGCAACAGATGCAGCAACACAACACTGATATCTATGGAGGTGGACGAGGTTTGATGTTTCCAGCTGATGTTTCTCCAATCTTGCAGCCGCCGTGGTCTCTCCCTCCGGTTCACTCCTTCAACCCGGCGGCTCACTTTGCAGCCGCCAACCCTGTCCGAGACCATGACTCATTCCTTGTCCCTCCCCCACCTTCATCTTATGGAAGCCTGTTCCATAGAAGGGTTCCTTCTCTACAGTTTGCGTACGAGGGTCCATCTTCTGACCATCTCCGGATCATATCAGATACTCTTGGACCGGTGGTTCAACCCGGTTCGGCTCCCTTTGGTCTCCAGGCCGAGTTGAGCAAGATGACTGCACAAGAAATCATGGATGCTAAGGCTCTTGCAGCATCTAAGAGTCATAGTGAAGCTGAAAGGAGACGCAGAGAGAGAATCAATAACCATCTTGCCAAGCTTCGAAGCTTATTGCCAAGTACAACCAAAACGGACAAAGCTTCATTGTTGGCAGAAGTGATTCAGCATGTGAAGGAGCTGAAGCGTCAAACTTCATTGATAGCAGAAACAAGTCCAGTGCCTACTGAAGTTGATGAGCTAACAGTTGATGCAGCTGATGAGGATGGCAAGTTTGTTATCAAAGCCTCACTTTGCTGTGAAGATAGGTCTGATCTCTTGCCTGACTTGATCAAAACCTTAAAAGCTTTGAGACTAAGAACCCTTAAAGCTGAGATCACAACGCTCGGCGGGCGAGTGAAGAATGTCTTGTTCATCACTGGAGAAGAAGATTCAAGTAGCAGTGAAGAGCAACAAAGCCAGGAACAGCAACAACAATATTGCATAAGCTCAATACAAGAAGCACTCAAGGCAGTGATGGAGAAGAGTGGTGGGGATGAGTCTGCTTCTGGGAATGTTAAGAGGCAAAGGACAAATATCAATATCCTTGAACACGggtctttata 1034 0.4632 MKEEDQGQCSSQAINNFQSYQEQLLLQQQMQQHNTDIYGGGRGLMFPADVSPILQPPWSLPPVHSFNPAAHFAAANPVRDHDSFLVPPPPSSYGSLFHRRVPSLQFAYEGPSSDHLRIISDTLGPVVQPGSAPFGLQAELSKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAETSPVPTEVDELTVDAADEDGKFVIKASLCCEDRSDLLPDLIKTLKALRLRTLKAEITTLGGRVKNVLFITGEEDSSSSEEQQSQEQQQQYCISSIQEALKAVMEKSGGDESASGNVKRQRTNINILEHGSL 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01789 344 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 155 204 IPR011598 GO:0046983
Bva01g01789 344 SMART finulus 161 210 IPR011598 GO:0046983
Bva01g01789 344 Pfam Helix-loop-helix DNA-binding domain 158 204 IPR011598 GO:0046983
Bva01g01789 344 PANTHER TRANSCRIPTION FACTOR BHLH30 72 339 - -
Bva01g01789 344 CDD bHLH_AtAIG1_like 150 228 - -
Bva01g01789 344 PANTHER TRANSCRIPTION FACTOR BHLH30 72 339 IPR045847 GO:0003700|GO:0006355
Bva01g01789 344 Gene3D - 150 211 IPR036638 GO:0046983
Bva01g01789 344 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 159 211 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01789 Bva-Chr1 18625289 18628047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01789 10 340 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 58.011 1.46e-113 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva01g01789 HLH 1.7e-12 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01789 01 18625289 18628047 Bva01g01789 01 18625289 18628047 ECH