Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01785 ATGGCTGGACCATCCTGGTTGGTGGACAAAAGTAGAATTGctacaaaaataaagagtgcATCTGGAGCATGTGAACCTGAAAAAGTTGTATGGAAAAGCAATCCTTCCAGAGCTTGCCCAAATTGTGCACATGTTATTGACAATAGTGATGTAACACAAGAGTGGCCTGGATTGCCAAAAGGTGTGAAATTTGATCCATCTGATCAAGAGATAATATGGCACTTGCTTGCAAAAGTTGGttctgaaaaattaaaacctcaTCTGTTCATTGATGAGTTTATCATTACCCTTGAAGTGGATGATGGAATTTGTTATACTCATCCTCAAAATTTACCAGGAGTGAAGCAAGATGGAAGTGCTTCCCACTTTTTCCATAGAGCAATCAAGGCATACAATACTGGCACTCGAAAACGTCGAAAGATACATGGTCAGGATTTTGGTGATGTCCGCTGGCACAAGACTGGAAAGACCAAACCTGTCATTTTGAATGGTATCCAGAAAGGCTGTAAAAAGATTATGGTTCTCTACACAAGCATGGTTAGGGGAGGAAAAGCTGAGAAAACTAATTGGGTCATGCATCAATATCACCTAGGAACAGAGGAGGATGAAAAGGATGGGGAGTATGTTATCTCAAAAGTATTTTACCAGCAACAGCCACAGCAGCAGACCACATTGGGTGATAAAGATGACCAGAATAATCTTGAACCTGTTAATGAAATAATTGCTAAAGTGGATCCTGTCACTCCCATGTCTGTGACTCCTGATCCTCCTCGAAATGAAAGGCGATGTTCAGACCTTGACCGAGGACTAGAATCATATCCTATTCCTCagCATCCCCAGACGGATTGTGTAAGCGATGCAATTCAAGTTGATGGCAAGGAGCATGACAAACTTGATCCTTCCAACGTAGAATTTCACCCCAATGAAGGAAAGAACCATAACGAAGATAATGTTGACGAAGACCCAAAATGGTATGACAGTGAGTCCCAGCATCTGTTGGATTCACAACAACTTGTTGAAGCACTGTCCTTGTGTGAGGATATCCTTCAAAGCCAGTCTCCCAACAGGGATGAAAATGGGAAGACTGAAGCACATAAAGACCGGCCTCGTCTTTCTGACTATGCTCATCTAGGACCAGAACATCTAAAGAAGGATTTAGAAGAATGTCAAAATCTTGTCCTAGATCCTCCAAATGTAGATGACACCCCTCCAGAGTTCCGTTTAAGTCAGCTGGAATTTGGATCACAGGACAGCTTTCTTTCTTGGGGTGCTAACAAGCTGGTTGACTA 1289 0.4119 MAGPSWLVDKSRIATKIKSASGACEPEKVVWKSNPSRACPNCAHVIDNSDVTQEWPGLPKGVKFDPSDQEIIWHLLAKVGSEKLKPHLFIDEFIITLEVDDGICYTHPQNLPGVKQDGSASHFFHRAIKAYNTGTRKRRKIHGQDFGDVRWHKTGKTKPVILNGIQKGCKKIMVLYTSMVRGGKAEKTNWVMHQYHLGTEEDEKDGEYVISKVFYQQQPQQQTTLGDKDDQNNLEPVNEIIAKVDPVTPMSVTPDPPRNERRCSDLDRGLESYPIPQHPQTDCVSDAIQVDGKEHDKLDPSNVEFHPNEGKNHNEDNVDEDPKWYDSESQHLLDSQQLVEALSLCEDILQSQSPNRDENGKTEAHKDRPRLSDYAHLGPEHLKKDLEECQNLVLDPPNVDDTPPEFRLSQLEFGSQDSFLSWGANKLVD 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01785 429 MobiDBLite consensus disorder prediction 294 324 - -
Bva01g01785 429 PANTHER SUPPRESSOR OF GAMMA RESPONSE 1 2 423 - -
Bva01g01785 429 MobiDBLite consensus disorder prediction 358 372 - -
Bva01g01785 429 Pfam No apical meristem (NAM) protein 59 197 IPR003441 GO:0003677|GO:0006355
Bva01g01785 429 Gene3D NAC domain 67 221 IPR036093 GO:0003677|GO:0006355
Bva01g01785 429 MobiDBLite consensus disorder prediction 351 372 - -
Bva01g01785 429 ProSiteProfiles NAC domain profile. 58 216 IPR003441 GO:0003677|GO:0006355
Bva01g01785 429 SUPERFAMILY NAC domain 43 216 IPR036093 GO:0003677|GO:0006355
Bva01g01785 429 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 2 423 IPR044799 GO:0003700
Bva01g01785 429 MobiDBLite consensus disorder prediction 244 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01785 Bva-Chr1 18588451 18592787 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01785 14 221 NAC Transcription Factor Family AT1G28470 55.300 3.69e-76 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva01g01785 NAM 5.8e-22 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01785 01 18588451 18592787 Bva01g01785 01 18588451 18592787 ECH