Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01779 ATGGCGCTCGCTGCTTCGCTTGCCTACAGGGCACCTCTGAAATGCTCATTTTCCTCAAATGGCGAAGCCTTACCTTCGTCAAATTCTACACCATTTTTGGGAGATTCCCTTTCCTTCTCACGTTCCCCTTTCCCTGGAAAACAATCACTTTCCAAGGGGAAACTTGTAGTTTTTGCTAAGAAGATTTCGGGGTTTGAGGAAGCCATGAAAATCAGAAGAGACCGTGATAAGCAAGGGGTGACAAAGGTTAAAGGACGGCCTCCATTGAGACGTGGAAGGGTATCACCACGTCTTCCTGTGCCCGATCACATACCAAAGCCTCCTTATGTGGGTTCGAATATGATGCCAGAAATTTCAAGTGAGCATCAGATTCATGATTCTGAAGGAATTGCTCGCATGAGGGCTGCAGGTGAGCTTGCTGCTCGTGTCTTAAAATATGCAGGAACATTGGTTAGGCCTTCTTTAACAACTAATGAAATTGATAAGGCAGTGCACCAGATGATAATTGATGCTGGTGCTTATCCCTCACCTCTTGGCTATGGTGGGTTTCCCAAAAGTGTGTGCACATCAGTTAATGAGTGCATGTGCCATGGAATTCCTGATTCTCGGCAGTTACAGaaTGGTGACATTATTAACATTGATGTGACAGTCTACCTGAACGGATATCATGGAGACACATCAAAGACTTTTCTTGTGGGGGATGTCAGTGATGCAATGAAAAAACTCGTTAAGGTAACCGAAGAGTGTTTGGAGAAAGGAATTGCTGTTTGCAAGGATGGTGCtagttttaagaaaataggaaAGAGAATCAGTGAGCATGCTGAAAAGTATGGCTATGGTGTGGTGGAGCGCTTTGTCGGGCATGGTGTGGGAAAAGTGTTTCACTCTGAACCTATTATTTTACATCATCGTAATGATAAACCTGGTTGCATGGTTGAAGGTCAAACATTTACAATTGAACCAATTCTTACTTTGGGAAGTATCAACTGCATTACATGGCCAGACAACTGGACAACTGTAACATCAGATGGCAGTCCTGCTGCACAATTTGAGCATACAATTTTGATAACAAGGACTGGAGCAGAAATTTTAACTACATGTTG 1103 0.4297 MALAASLAYRAPLKCSFSSNGEALPSSNSTPFLGDSLSFSRSPFPGKQSLSKGKLVVFAKKISGFEEAMKIRRDRDKQGVTKVKGRPPLRRGRVSPRLPVPDHIPKPPYVGSNMMPEISSEHQIHDSEGIARMRAAGELAARVLKYAGTLVRPSLTTNEIDKAVHQMIIDAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQNGDIINIDVTVYLNGYHGDTSKTFLVGDVSDAMKKLVKVTEECLEKGIAVCKDGASFKKIGKRISEHAEKYGYGVVERFVGHGVGKVFHSEPIILHHRNDKPGCMVEGQTFTIEPILTLGSINCITWPDNWTTVTSDGSPAAQFEHTILITRTGAEILTTC 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01779 367 Gene3D Creatinase/methionine aminopeptidase superfamily 87 367 IPR036005 -
Bva01g01779 367 PANTHER METHIONINE AMINOPEPTIDASE 25 366 - -
Bva01g01779 367 Hamap Methionine aminopeptidase [map]. 122 367 IPR002467 GO:0006508|GO:0070006
Bva01g01779 367 MobiDBLite consensus disorder prediction 74 108 - -
Bva01g01779 367 TIGRFAM met_pdase_I: methionine aminopeptidase, type I 124 366 IPR002467 GO:0006508|GO:0070006
Bva01g01779 367 Pfam Metallopeptidase family M24 132 357 IPR000994 -
Bva01g01779 367 PRINTS Methionine aminopeptidase-1 signature 187 200 IPR001714 -
Bva01g01779 367 PRINTS Methionine aminopeptidase-1 signature 309 321 IPR001714 -
Bva01g01779 367 PRINTS Methionine aminopeptidase-1 signature 209 225 IPR001714 -
Bva01g01779 367 PRINTS Methionine aminopeptidase-1 signature 279 291 IPR001714 -
Bva01g01779 367 CDD MetAP1 130 365 IPR002467 GO:0006508|GO:0070006
Bva01g01779 367 SUPERFAMILY Creatinase/aminopeptidase 83 366 IPR036005 -
Bva01g01779 367 ProSitePatterns Methionine aminopeptidase subfamily 1 signature. 285 303 IPR002467 GO:0006508|GO:0070006
Bva01g01779 367 PANTHER METHIONINE AMINOPEPTIDASE 25 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01779 Bva-Chr1 18537173 18541622 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01779 01 18537173 18541622 Bva01g01779 01 18537173 18541622 ECH