Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01776 ATGGATTTCACTGAGAAAATGCAAAGGCAGAAAATGGGGCTTCGTGAGTACATCGAGGCATTAGAAGTAGAACGTCGTAAGATTGAGGTTTTCCAGAGAGAGCTTCCCTTTTCCTTGGAGCTTGTTACGCAAGCCATTGAAGCGTGTCGGCAGCAGCTATCTGGGACGACGACGGAGTATAATTTGAATGGCCAATCGGAGTGTTCGGAGCAGACATCGACGGAAGGCCCTGTTCTGGAGGAATTCATTCCTATTAAGAAAAGGGCTTCCCCTGATTGTGATGAGGACGACGAAGATGAGCAACATTCACATAAGTCCAAGATTCCTAAGGATCAAAACactgataaaaagaaatcagatTGGCTTAGATCTGTTCAGCTATGGAACCCAGATCCCCCAGCTAAAGAGGATGTACCCAGAAAGGCTTCAGTTGTGGAAGTGAATAGAAATGGCGGAGCTTTTCAACCATTTCACAGAGAAGAAAGTGATGGAAAGACAAATGTATCAGTTGCTAAAGCAGCACCAACCACTTCACCGGCCTTGCCGGCGACGAGTTCTACGGCGGGAGCAGCCACCGGAGGTAATGGTGGAAGCAACCgaaaagaggagaaagaatCACAAGCTCACAGAAAGCAACGTCGCTGCTGGTCACCGGAGCTGCATAAACGCTTCCTGCATGCCTTGCAGCAACTTGGTGGTCCAGATTCTGCCACACCAAAGCAAATCAGGGATCTAATGAAGGTTGATAGCCTCACAAATGACGAAGTCAAAAGCCATTTACAGAAATTTCGTCTGCACACCAGAAGACCAGCCTCTATAATGCACAACAATGCCAATCCACACACGGCTCCTTTTGTCCTTGTCggaaatatttttgtccaaCCACCGGATTATGCCGGGGTAGCTACTTCATCGGGGGAGGTGACCACGGTGGGTCCGTCGGGGATTTATGCTCCGGTGGCGGCGCATCCTCCTTCTGTGGCAACCCCATTAGTTCAGAAGCCACAGTTCAAGAAATTAGAGCAGTGTCATTCAGAAGAAAGGACTAATCATAGTGAAGGAGCAGTTCACTTGAATTCCCCAGCATCATCTTCTTCCACCCACACGACCACAACTTCCCATGGCTATTA 1130 0.4664 MDFTEKMQRQKMGLREYIEALEVERRKIEVFQRELPFSLELVTQAIEACRQQLSGTTTEYNLNGQSECSEQTSTEGPVLEEFIPIKKRASPDCDEDDEDEQHSHKSKIPKDQNTDKKKSDWLRSVQLWNPDPPAKEDVPRKASVVEVNRNGGAFQPFHREESDGKTNVSVAKAAPTTSPALPATSSTAGAATGGNGGSNRKEEKESQAHRKQRRCWSPELHKRFLHALQQLGGPDSATPKQIRDLMKVDSLTNDEVKSHLQKFRLHTRRPASIMHNNANPHTAPFVLVGNIFVQPPDYAGVATSSGEVTTVGPSGIYAPVAAHPPSVATPLVQKPQFKKLEQCHSEERTNHSEGAVHLNSPASSSSTHTTTTSHGY 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01776 376 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 3 372 - -
Bva01g01776 376 MobiDBLite consensus disorder prediction 198 217 - -
Bva01g01776 376 Pfam Myb-like DNA-binding domain 213 262 IPR001005 -
Bva01g01776 376 Gene3D - 210 268 - -
Bva01g01776 376 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 208 268 IPR017930 -
Bva01g01776 376 MobiDBLite consensus disorder prediction 344 376 - -
Bva01g01776 376 MobiDBLite consensus disorder prediction 65 119 - -
Bva01g01776 376 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 3 372 IPR044787 GO:0003700|GO:0006355
Bva01g01776 376 MobiDBLite consensus disorder prediction 169 194 - -
Bva01g01776 376 MobiDBLite consensus disorder prediction 151 217 - -
Bva01g01776 376 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 211 266 IPR006447 GO:0003677
Bva01g01776 376 SUPERFAMILY Homeodomain-like 209 269 IPR009057 -
Bva01g01776 376 Coils Coil 14 34 - -
Bva01g01776 376 MobiDBLite consensus disorder prediction 354 376 - -
Bva01g01776 376 MobiDBLite consensus disorder prediction 81 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01776 Bva-Chr1 18519859 18521879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01776 1 322 G2-like Transcription Factor Family AT1G68670 51.642 9.26e-92 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva01g01776 Myb_DNA-binding 2.1e-05 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01776 01 18519859 18521879 Bva01g01776 01 18519859 18521879 ECH