Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01770 ATGCCGTTAGCCTCATTAATAAAACCCCAGAAATCTCCCAACATTCTCCACTCTCAGTTACTGATTTCAATGGCGAAACTGATGGGTCCTCTCTGTTTCgtcctcttcttcctctgcaaCTCTTCGCCATTTGTACACTCTCGGAGCCTACCCCAGCGCTTGAAAACAACAGTATTTGATGTTACTGCTTCTATTGAAAAGACCCAGAGACTCTACTCACTGAACCCAAAAGCTTCGTTCACCCAACAGCAGCTCAGCTCTTCAGCTTCGTCTTCGCTCACTCTGCAACTACATTCTCGAGCTTCGGTACATAAAGTTTCACACAGTGACTACAAGTCTCTAACTTTGGCCCGACTCGAGCGCGACTCGGCCCGAGTCAGATCTTTAACGACACTGTTGGATCTGGCGGTGAAGGGCATTGCTCAATCGGATCTTCACCCGGTTCAGGAAAGCAAGGAGCTTCAGTTTGGGGTTGAAGAATTGCAGGGTCCGATTATCTCTGGGACCAGTCAGGGAAGCGGCGAGTACTTCTCACGTGTTGGAATTGGTAAACCGCCGAGTCCGGCTTACATGGTGCTTGACACCGGTAGTGATGTCAGCTGGATACAGTGTGACCCCTGCGCAGATTGCTACCAGCAAGTCGACCCCATCTTCAAGCCGGATTCGTCATCTTCGTATGCGCCGCTCTCGTGCGAGAGCAATCAGTGCAAGTCCCTGGATATCTCTGAATGCCGAAACGGCACCTGCCTCTACGAGGTCTCTTATGGCGATGGATCCTATACCGTCGGCGATTTCGTGACTGAGACGGTTACCTTCGGCTCGACTTCCGTCAGCAACATAGCCCTCGGCTGCGGCCACAACAACGAAGGATTGTTTGTTGGTGCAGCCGGCTTGCTCGGGCTCGGTGGTGGCTCGCTTTCTTTCCCTCAGCAGCTCAATGCCTCGTCTTTCTCCTACTGCCTCGTGGACCGTGACTCAGATTCCGCTTCGACCCTCGAGTTTGACTCGCGGTTTCCGCCAAACGCCGTTACTGCCCCGTTACGCCGCAACCCAGAACTCGACACTTTCTACTACCTCGGCTTGACGGGACTCAGCGTCGGGGGCGAGTTGCTCCCGATTCCGGAGTCGAGCTTTGCGGTTGACGCTACCGGCACCGGCGGAATCATCGTGGACTCGGGCACGGCGGTGACTCGGTTGCAGAGCGACTTGTACAACTTGCTCCGCGACGCGTTCAGGAAGGGTACACAGGGATTGCCTCTAGCGGACAACGTGGCATTGTTTGACACGTGTTACGACCTGTCATCGAGGAGCAGCGTGGATGTTCCAACGGTGTCGTTTCAGTTCCCAGATGGGAAAGAGTTACCGTTACCGGCCAAGAACTACCTGATACCTATTGACTCGGCGGGGACGTTTTGCTTTGCATTCGCGCCCACAACGTCGTCGTTATCGATAATTGGTAACGTTCAGCAGCAGGGGACACGCGTCGGTTTTGATCTGGCTAACTCTCTCGTTGGATTCTCTCCGAATAGTTGTta 1535 0.5303 MPLASLIKPQKSPNILHSQLLISMAKLMGPLCFVLFFLCNSSPFVHSRSLPQRLKTTVFDVTASIEKTQRLYSLNPKASFTQQQLSSSASSSLTLQLHSRASVHKVSHSDYKSLTLARLERDSARVRSLTTLLDLAVKGIAQSDLHPVQESKELQFGVEELQGPIISGTSQGSGEYFSRVGIGKPPSPAYMVLDTGSDVSWIQCDPCADCYQQVDPIFKPDSSSSYAPLSCESNQCKSLDISECRNGTCLYEVSYGDGSYTVGDFVTETVTFGSTSVSNIALGCGHNNEGLFVGAAGLLGLGGGSLSFPQQLNASSFSYCLVDRDSDSASTLEFDSRFPPNAVTAPLRRNPELDTFYYLGLTGLSVGGELLPIPESSFAVDATGTGGIIVDSGTAVTRLQSDLYNLLRDAFRKGTQGLPLADNVALFDTCYDLSSRSSVDVPTVSFQFPDGKELPLPAKNYLIPIDSAGTFCFAFAPTTSSLSIIGNVQQQGTRVGFDLANSLVGFSPNSC 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01770 511 Gene3D Acid Proteases 151 334 IPR021109 -
Bva01g01770 511 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 42 511 - -
Bva01g01770 511 Gene3D Acid Proteases 337 511 IPR021109 -
Bva01g01770 511 Pfam Xylanase inhibitor N-terminal 176 334 IPR032861 -
Bva01g01770 511 Pfam Xylanase inhibitor C-terminal 357 507 IPR032799 -
Bva01g01770 511 PANTHER ASPARTYL PROTEASES 42 511 IPR001461 GO:0004190|GO:0006508
Bva01g01770 511 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 191 202 IPR001969 GO:0004190|GO:0006508
Bva01g01770 511 ProSiteProfiles Peptidase family A1 domain profile. 176 507 IPR033121 -
Bva01g01770 511 SUPERFAMILY Acid proteases 170 511 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01770 Bva-Chr1 18477869 18479710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01770 166 511 Miscellaneous Gene Families AT1G77480 27.487 1.24e-24 104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01770 01 18477869 18479710 Bva01g01770 01 18477869 18479710 ECH