Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01768 ATGCAAAGCTTCAAGATGGTTTCTCCGCCAAATTCTCATCTCTACTGTGATTCCTCCTTCTTTCTTAGAGAAGACGACGCTACCAGAAACCAAACACGTTTCCATAATGTTCAGGAGCTTCAACAATCCGCTGCTGCCTTTCAACATGACGATGCTGTTGATTTAAGCTCAAgCTCTATGTTTACTGTAAAGTCGAGCAATGTCGCTGTTGTTGCTAATAACTTGCAGTATGGAACATTGAACACGAACATTGGGTCTGCAGAGATTGGTTCAACAGGGGCAGGGTGCCTTGACACAGAGCAGCATCACATATGTCAGAAAGGAGCCACCATGGCCACGGCGCCGCCGCCGCCGGGGAACGGGCATGTGGAGAATTGGGGTGATTCTGGATTGGCAGATAATAGCCAACAAACTGATACTTCCACTGATATTGACACTGATGACAGAAACCAGTGCAATATAGTTCAGCATGGAGCACTTGTTGCAGTGGATTCCATGGATCAATCGAAAGCCAAAACTGAAGACCACAGGACCCTTCGCAGGTTGGCACAGAATCGAGAAGCCGCAAGGAAGAGTAGGCTAAGGAAAAAGGCATATGTTCAACAATTGGAGAATAGTCGTCTCAGGCTTGCACAATTAGAGCAAGAGCTGCAACGTGCACGTCAGCAGGGTATATTTATCCCAACTGGGTTTCAGGGTGACCATGGTCATTCAGTGGCTGGAAATGGTGCCTTAGCATTTGATATGGACTATTCGAGATGGGTCGATGAGCATCAACGGCTGATCAATGATCTAAGATCAGCTGTGAATTCTCAAATAGGCGAAAATGAATTGCAGCTACTTGTTGAGGGTGTTGTGTTACATTATGATGAATTATTTAGGCTAAAGAGCATAGGGGCAAAAGCTGATGTATTTCACATGCTTTCTGGGATGTGGAAGACACCAGCAGAAAGATGTTTCATGTGGCTTGGTGGATTCCGATCATCTGAACTTCTCAAgGTACTTGAGAACCACCTTGAGCCATTAACAGAACAACAGATAGTGGGCATTTACAATCTGCTGCACTCTTCCCAGCAAGCTGAAGATGCTTTATCACAAGGCATGGATGCTTTGCAGCAATCCCTTTCGGAGACACTCTCCCGGTCCTCCCTTGGATCAGCTGCTTCGGGGAATGTTGCTGATTACATGGGACAAATGGCAATTGCAATGAGCAAGCTAGCCACACTGGAGAATTTCCTTTATCAGGCTGATCTCCTGAGACAACAAACACTCCAACAATTGCAGAGAATTTTGACAGCACGCCAAGCTGCTCGCGCTCTACTTGTCATACATGATTATATTTCGCGGCTGCGAGCACTTAGTTCATTGTGGTTAGCCCGTCCTAGAGAATA 1391 0.4601 MQSFKMVSPPNSHLYCDSSFFLREDDATRNQTRFHNVQELQQSAAAFQHDDAVDLSSSSMFTVKSSNVAVVANNLQYGTLNTNIGSAEIGSTGAGCLDTEQHHICQKGATMATAPPPPGNGHVENWGDSGLADNSQQTDTSTDIDTDDRNQCNIVQHGALVAVDSMDQSKAKTEDHRTLRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQRARQQGIFIPTGFQGDHGHSVAGNGALAFDMDYSRWVDEHQRLINDLRSAVNSQIGENELQLLVEGVVLHYDELFRLKSIGAKADVFHMLSGMWKTPAERCFMWLGGFRSSELLKVLENHLEPLTEQQIVGIYNLLHSSQQAEDALSQGMDALQQSLSETLSRSSLGSAASGNVADYMGQMAIAMSKLATLENFLYQADLLRQQTLQQLQRILTARQAARALLVIHDYISRLRALSSLWLARPRE 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01768 463 Gene3D - 176 225 - -
Bva01g01768 463 MobiDBLite consensus disorder prediction 129 148 - -
Bva01g01768 463 PANTHER TRANSCRIPTION FACTOR TGA9 47 463 - -
Bva01g01768 463 Pfam Seed dormancy control 262 336 IPR025422 GO:0006351|GO:0043565
Bva01g01768 463 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 180 195 IPR004827 GO:0003700|GO:0006355
Bva01g01768 463 PANTHER TRANSCRIPTION FACTOR PERIANTHIA 47 463 - -
Bva01g01768 463 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 175 219 IPR004827 GO:0003700|GO:0006355
Bva01g01768 463 MobiDBLite consensus disorder prediction 127 148 - -
Bva01g01768 463 CDD bZIP_HBP1b-like 177 229 - -
Bva01g01768 463 ProSiteProfiles DOG1 domain profile. 244 460 IPR025422 GO:0006351|GO:0043565
Bva01g01768 463 Pfam bZIP transcription factor 177 215 IPR004827 GO:0003700|GO:0006355
Bva01g01768 463 SUPERFAMILY Leucine zipper domain 177 219 IPR046347 GO:0003700|GO:0006355
Bva01g01768 463 SMART brlzneu 173 244 IPR004827 GO:0003700|GO:0006355
Bva01g01768 463 Coils Coil 196 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01768 Bva-Chr1 18461603 18464889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01768 3 463 bZIP Transcription Factor Family AT1G68640 60.888 2.56e-173 492
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bva01g01768 DOG1 3.5e-29 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01768 01 18461603 18464889 Bva01g01768 01 18461603 18464889 ECH