Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01760 ATGGTCACCGATGCTGAGGGTTCCCGTCGTAAGCACCGACGATCATCTTCCCCTGAAGAGGTCGAGAGATCTTCGAAGCGCCACAAGCACCGCCACCATGGCCATCGGCACCACCGACACCGCCATGGTAGCACAAAGTACGAAGAAGAAATCATACGCGATGATGAAACTGTTGCTACTGTTGCCACTTCAAATTCTGTTGTTGATTCTCGTCTGGATAAGCACCGACCGGAGGAGGATTTAGAGGAGGGAGAGATTCTCGAAGAGGAGGTCGGTGAGATTGGGAAAAAGCACATCGAGCCTGATGCTGACTCGGGTGAAATTCAGGTGACAAGAGATCGAGATGCTCGATCTGATACAGCAATTCTGGGACTTCATGTTGAAGATGCTTATTTGCATGAGGAAGCTGTTGTCTCTCTCGGAGAGACTGCAGGGATCAAAGGTAAACTTTCAAAAACTAAGGGAGAGGACATCTATGATGAAAAATTTGTGACTAGTACAGCATCTGATGGAGAAGACAGGACTTTCTGTCAGAGTGGCATTAGTCATAGAACACTTGAAGACTATGTTTCTCCTACTCGCTCAACTGTTGTGCCTCAAGATAAAAAGGATAGAAGAGCCAGTAGAGATGGTCTGGTCAATGGAAATGTGGATTCTAAATCTTCTAAAGAAGTTAAGAGGCTTCATGGGGAACTTGGCTCTTCAAAAGGAATTGAGAAGCCAAGAAGTGACTatggtgatgatgatgatgattcgAAGGCTAATGGAAGCAAATTAATCATCCACAGGAATTCATCATCTGAAAGTGCAGGAGAGAAACATAGGACCTCAAGGAATTCACCTTCCCGTTATAGATATAGGAGCCAATCAAGATCAAGTGGTTGTACTAGGGACAGGTCTCGATCTCGTAGTAAAGAATATACTCATTCAAAGAGAAGGCACCTTGGAGAACAGGGTGCCCTTTCATATGGTGGTAGAGACAAGACTGACTATGACCTAGATGATGAAAGAATGGAGGAAAGTAGCAGGGGGCATGGCCATGATAGTAAAGTCTTGATCATAGATGATGCAAGGGAACACAGTTCTAGTTATAGCAGCAAATATGCTGGAAAGGAGGATAGGCATCACAGTCAGGAGACCCGAGATAGGAGCAAGGAGAGGGATGTGGATAGAGacttgaaaagagaaaaggaacgAGAAAGGAGCAGGAATAAGGAGATTGACCGGGTGCTTAGGAGGGAAAAGGAACGAGAAAGGAGCCATGAGCGGGATCGAAGGGATGTTGAAAAAGATAGGAGAAGGGGAAGGGAGATGGATAGGGATAGGAGAAGAGATAAGGAATGGGATAGGAGCTTTGATGCAGAGGTTGACAGGGATAGGAGAAGGGAGAAGGAAAGAGATAGGAGCAGGGACAGAACAAGAGGTGGTGTTGAGAGAGATAGAGACCGTGACATTGAAAGGGATGATAGAAACCGAAGTAGGGATAGAAttagggaaagagagagagaaaggaaagataaTAGAATTAGGAATAAGGATAAAGAGTCTGTCAATGATAAGGATAGACATTTGGTTGACAGGGATGGCCATGACAGTCGAGATAGATATAGACGCTCTAGGCATTCTAATCTTGAAGAAACAGAATACCACcaagatagaaaaagaaattctgaGCGTCGAAACTCTATGGCCAACTCCTTGGAAGGGGGTGAAAACAAACCAGAAAGAGGTGAGTATGAACAGGATGACTACGAAGAGAAAGATACATTACAATTTGctgaacaagaagaagaagatctCAACAGAATTAAGGAGGAGAGTAGAAGGAGAAGGGAAGCTATCTTAGAGAAATACAAGCAGCGGCAGCGAGTAGATCAAACacctgaaaatgaagaaaaagACAAGGAGCCTGTAGACATTCCTGTTGCCACTCCAGAAGTTCCTGATGGTAAGAATGGTGTTGATGTCTATGATGCGGAGACAACTTTTGCTGTTGGGAAATcaccagaaaatgaaaatgttgctTCTGAGAAGACTTCTGGTGCTGGGGGGCTAGGAGAGGGTACTCCAAAGAGTGAAGGATCAAATGATGTGTTTTGTGATGATATATTTGGCGAGACACCAACTGGGGTTCGGAAATTGGGCAAAGGAGATGGCTTACGGATTGAGAGGAGTGGCCTGCACGACAATTGGGATGATGCAGAGGGGTATTACAGCTATCGTTTTGGTGAAATACTTGATGGCCGATATGAAGTTACTGCTGCTCATGGGAGAGGTGTCTTTTCAACAGTTGTTCGTGCAAAGAATCTCAAGTCTGGTAATGGTGAGCCAGAAGAAGTTGCAGTTAAAATTATTCGTAATAATGACACAATGTACAAGGCTGGTATGGATGAGTTGGTCATATTAAAGAAACTAGTAGGTGCAGATCCAGAGGATAAGCGTCATTGTGTTCGTTTCCTTTCAAGTTTTAAGTATAGGAATCACCTTTGTTTAGTTTTTGAATCTCTTCATATGAATCTGCGAGAGGTTTTAAAGAAGTTTGGCCGCAATATTGGCCTTAAGCTAACTGCTGTAAGAGCATATGCTAAACAATTGTTTATTGCCCTGAAGCATCTTCGCAATTGTGGTGTTCTCCACTGTGATATTAAGCCAGATAACATGTTGGTAAATGAGGCTAAAAATGTGTTGAAGCTTTGTGACTTTGGTAATGCCATGTTTGCTGGTAAGAATGAAGTTACACCATACCTTGTAAGCCGCTTTTACCGTGCCCCTGAGATAATACTTGGCTTGCAGTATGATCATCCGTTAGATATTTGGTCTGTAGGCTGTTGTTTGTATGAACTCTATACTGGGAAAGTTCTTTTTCCTGGTCATACTAACAATGACATGCTACGGCTTCACATGGAATTGAAGGGCCCTTTTCCCAAAAAGATGCTTCGCAAGggAGCTTTTACTGAGCAGCATTTCGATCTGGATCTGAATTTTCTTGCCACTGAAGAGGACCCAGTAACAAAAAAGATGATCAAGCGGATGATTCTCAACATAAAGCCTAAGGATATTGGAACAATTATTACTGGCTTTCCTGGAGAGGACCCAAAGATGCTAGCTAACTTCAAGGATCTTCTTGAAAAAGTTTTTGTCTTGGATCCAGACAAGAGACTGACCGTTTCACAAGCGTTGAACCACCCATTCATCACGGGCAAGATAACCAGCCAATGTGCTGAGGCAACCCTCCAGTGCATAGATGCTTTGAGGGACCCAGGAGAAGGCATGTGCACTGAGGTGTTTGGCTTTGTTGTTGGAGAGAATTTGCATCTgTACAGTAATCATGGTCCTGCAATTTTTAATGGACCTGGTCTAGCATCTCCAGGAATCGTCAACAGGTTTAACATTGGCTGGGTAAAATTGATGGAAAGCAAGTCCTCGGAATATGGAATGGACATTTTGGTGATCAGACCACTGGAAGTTTCTGCCATCGTCCCAGTGAAATGCACGCTCAGCAGTGACAGGAGAAATGATGGAAATGAGGAGATAACGACTTCTATAGATTCAGAGGATCTCTGGAGCACAGAGCTGTGCATTGAAGGAAAGACAGGTTCTGAGTA 3605 0.4202 MVTDAEGSRRKHRRSSSPEEVERSSKRHKHRHHGHRHHRHRHGSTKYEEEIIRDDETVATVATSNSVVDSRLDKHRPEEDLEEGEILEEEVGEIGKKHIEPDADSGEIQVTRDRDARSDTAILGLHVEDAYLHEEAVVSLGETAGIKGKLSKTKGEDIYDEKFVTSTASDGEDRTFCQSGISHRTLEDYVSPTRSTVVPQDKKDRRASRDGLVNGNVDSKSSKEVKRLHGELGSSKGIEKPRSDYGDDDDDSKANGSKLIIHRNSSSESAGEKHRTSRNSPSRYRYRSQSRSSGCTRDRSRSRSKEYTHSKRRHLGEQGALSYGGRDKTDYDLDDERMEESSRGHGHDSKVLIIDDAREHSSSYSSKYAGKEDRHHSQETRDRSKERDVDRDLKREKERERSRNKEIDRVLRREKERERSHERDRRDVEKDRRRGREMDRDRRRDKEWDRSFDAEVDRDRRREKERDRSRDRTRGGVERDRDRDIERDDRNRSRDRIRERERERKDNRIRNKDKESVNDKDRHLVDRDGHDSRDRYRRSRHSNLEETEYHQDRKRNSERRNSMANSLEGGENKPERGEYEQDDYEEKDTLQFAEQEEEDLNRIKEESRRRREAILEKYKQRQRVDQTPENEEKDKEPVDIPVATPEVPDGKNGVDVYDAETTFAVGKSPENENVASEKTSGAGGLGEGTPKSEGSNDVFCDDIFGETPTGVRKLGKGDGLRIERSGLHDNWDDAEGYYSYRFGEILDGRYEVTAAHGRGVFSTVVRAKNLKSGNGEPEEVAVKIIRNNDTMYKAGMDELVILKKLVGADPEDKRHCVRFLSSFKYRNHLCLVFESLHMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFAGKNEVTPYLVSRFYRAPEIILGLQYDHPLDIWSVGCCLYELYTGKVLFPGHTNNDMLRLHMELKGPFPKKMLRKGAFTEQHFDLDLNFLATEEDPVTKKMIKRMILNIKPKDIGTIITGFPGEDPKMLANFKDLLEKVFVLDPDKRLTVSQALNHPFITGKITSQCAEATLQCIDALRDPGEGMCTEVFGFVVGENLHLYSNHGPAIFNGPGLASPGIVNRFNIGWVKLMESKSSEYGMDILVIRPLEVSAIVPVKCTLSSDRRNDGNEEITTSIDSEDLWSTELCIEGKTGSE 1201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01760 1201 MobiDBLite consensus disorder prediction 169 653 - -
Bva01g01760 1201 PANTHER DUAL SPECIFICITY PROTEIN KINASE 455 1068 - -
Bva01g01760 1201 Coils Coil 397 431 - -
Bva01g01760 1201 Gene3D Transferase(Phosphotransferase) domain 1 810 1066 - -
Bva01g01760 1201 MobiDBLite consensus disorder prediction 1 105 - -
Bva01g01760 1201 MobiDBLite consensus disorder prediction 594 640 - -
Bva01g01760 1201 SMART serkin_6 750 1065 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01760 1201 MobiDBLite consensus disorder prediction 1 25 - -
Bva01g01760 1201 MobiDBLite consensus disorder prediction 292 316 - -
Bva01g01760 1201 CDD STKc_PRP4 749 1065 IPR044092 GO:0004674|GO:0006468|GO:0045292
Bva01g01760 1201 MobiDBLite consensus disorder prediction 169 197 - -
Bva01g01760 1201 Gene3D Phosphorylase Kinase; domain 1 721 809 - -
Bva01g01760 1201 Pfam Protein kinase domain 752 1065 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01760 1201 MobiDBLite consensus disorder prediction 90 105 - -
Bva01g01760 1201 ProSiteProfiles Protein kinase domain profile. 750 1065 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01760 1201 MobiDBLite consensus disorder prediction 666 697 - -
Bva01g01760 1201 ProSitePatterns Serine/Threonine protein kinases active-site signature. 877 889 IPR008271 GO:0004672|GO:0006468
Bva01g01760 1201 MobiDBLite consensus disorder prediction 327 561 - -
Bva01g01760 1201 Coils Coil 590 613 - -
Bva01g01760 1201 MobiDBLite consensus disorder prediction 220 257 - -
Bva01g01760 1201 SUPERFAMILY Protein kinase-like (PK-like) 737 1069 IPR011009 -
Bva01g01760 1201 MobiDBLite consensus disorder prediction 26 42 - -
Bva01g01760 1201 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 455 1068 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01760 Bva-Chr1 18417015 18426498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01760 746 1067 MAP Kinase Gene Family AT2G18170 30.240 1.93e-30 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Bva01g01760 Pkinase 1.1e-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01760 01 18417015 18426498 Bva01g01760 01 18417015 18426498 ECH