Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01756 ATGGAGAAGTTGGCATCGACGGCAACGACGTCGTATGTGAGCTGGAAGGAGGTGTTCATATCCAACGACAGAGGGAGAAGGGAGGTTCACTATTTCCTGAAGAGAAGGGATGGGAGCTCAGATCTGGCTGTCGTAGGGAAAGAGAAGAGCTCAAGGCATATGACTTATCACTATGCCATTCGGCATGAAGCGCTAGTTCTTATGGGACCATCTTTCTCGCTGTTGAAGCTCAAATCACGCAGAGAGGTGATTGATTGGTTGAATTCAATCTGTTCAGACTCATCAACAGAGGACGTATCTGCTGCCGCTCCTATAGATTCCAGAGATGGTTGTGGTTACGGGATGGATATTGAAACCTTAAAGGATAATCAATTGCGGAAACTGGGTAGTTTTACAACAGACTTCTCATGGTTAGGGTCTTCATGGACCTGTAGGAAGAGAAGACAGCACTTTCAGTCGTTTAGGCGGAATGGTTTTAAGATATCAGTTTATGACTTCGTATATGTTTTAGCAGAGGAAGACAAACGTCTTGTTGCCTACTTGGAAGATATGTATGAGGATTCCAGAGGCAACAAGATGGTTGTGGTACGCTGGTTTCACAAAATTGATGAGGTTGGTATTGCTTTGCCTCGCCCTTTTTGCGACAgagagattttcttttctctttgtctTCAAGATCTAAGTGTTGAATGCATAGATGGATTGACTACCGTCCTCAGCCCCCAGCATTACGAAAAGTTTCAGAAGGAGGCAGGACATACTCCATTGGAACCATTTGTTTGTGACAGTCAGTTTGACAACGATGAtgttaaaccctttgatataactcaaattaaagGTTACTGGAGGCAGGAAATACTCAGATACATGTATACCCTTTCTGATTTGAAGTCTAATGGGATTTCTGAGCAATCTGACGATGGCCCAAAACAAGAAGAGAACCTTCTTTGTTCTACTGGGGTGAGACCTAAGAAGAGATTGCGCAGGGTGAAAATTGATGTCCAAGATTCAGTTGATTTGGCTGCTGTGGAATCAGAAAATCAGAAAAGTAGAATTGGAGAAAATTCCTTAAAACAGTCTGTGTCCTCCCAGCTTACAAGCatcaaagaaacaaatgaaatttctttacaGAGTTTACCAGTGGGTTCTCAAGTTGAGGTCCTCTCTCAAGACAGTGGAATTAGAGGCTGTTGGTTTAGGGCTTCTGTTATTAAGAAGCACAAAAATAAGGTGAAGGTGCGATATCATGACATTCAAGATGCAGCTGATGAAGATAACAAGCTTGAGGAATGGATTCCAGCTTCCAGAATTGCAGCAGAAGATAATTTGGGCATCCACATGCATGGAAGGACCATGGTTCGTCCTGCCCCACAGTCTAATCAATGTGAAATTTCCTGGGTGGTTGGTGCGGGTTCCCTTGTTGATGTATGGTGGCATGATGGCTGGTGGGAAGGAATTGTTGTTCAAAAGGAGTCTGAAGCTAAATATCAAGTTTATTTTCCAGGGGAAAAACTGGTGTcatcttttgattttggtaaCCTGAGACGTTCTCAGGAGTGGATGGGGAATGAATGGATGCATTTGAGAGAGCGGGTTGACCTTGTGAGTTCTATATTGTCTAGCCTGAAAACAGCGCAGAGTCCCTGCGAATCTTATGATGGTAAAGCTACTGTGGCATCATCCCCCGGAGATGGCATACAATCAAACCAAGAAAACAACTGTTCGGATGCTGAAATTGATAAATCAAAATCGGTGGTGGTTCCGGACCTTTTGAAGGATGGTTTGCTATATCAATTGAGATGGAAATCATCTAGGAAGAGGAGACGTGGTAGCCCTACTCGTAAGCTGCAATACTCTGAAACTTACGGTAGAAAGTCCCCGAAGGAGTCACAGTCCCATGCTTCTGACAAATTCATGGTTCCAGCATCCTTGAAGGTTGAGCATGATGACTACAAATACAGGGGAGATCCTTCTATTTTGGGTTCTTCAGTTGTGCCTTCTTTAACTAACTTGGTTATGTGTAGGTG 2027 0.4193 MEKLASTATTSYVSWKEVFISNDRGRREVHYFLKRRDGSSDLAVVGKEKSSRHMTYHYAIRHEALVLMGPSFSLLKLKSRREVIDWLNSICSDSSTEDVSAAAPIDSRDGCGYGMDIETLKDNQLRKLGSFTTDFSWLGSSWTCRKRRQHFQSFRRNGFKISVYDFVYVLAEEDKRLVAYLEDMYEDSRGNKMVVVRWFHKIDEVGIALPRPFCDREIFFSLCLQDLSVECIDGLTTVLSPQHYEKFQKEAGHTPLEPFVCDSQFDNDDVKPFDITQIKGYWRQEILRYMYTLSDLKSNGISEQSDDGPKQEENLLCSTGVRPKKRLRRVKIDVQDSVDLAAVESENQKSRIGENSLKQSVSSQLTSIKETNEISLQSLPVGSQVEVLSQDSGIRGCWFRASVIKKHKNKVKVRYHDIQDAADEDNKLEEWIPASRIAAEDNLGIHMHGRTMVRPAPQSNQCEISWVVGAGSLVDVWWHDGWWEGIVVQKESEAKYQVYFPGEKLVSSFDFGNLRRSQEWMGNEWMHLRERVDLVSSILSSLKTAQSPCESYDGKATVASSPGDGIQSNQENNCSDAEIDKSKSVVVPDLLKDGLLYQLRWKSSRKRRRGSPTRKLQYSETYGRKSPKESQSHASDKFMVPASLKVEHDDYKYRGDPSILGSSVVPSLTNLVMCR 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01756 675 Pfam BAH domain 161 268 IPR001025 GO:0003682
Bva01g01756 675 Gene3D - 141 380 IPR043151 -
Bva01g01756 675 SMART BAH_4 159 276 IPR001025 GO:0003682
Bva01g01756 675 MobiDBLite consensus disorder prediction 548 579 - -
Bva01g01756 675 MobiDBLite consensus disorder prediction 606 637 - -
Bva01g01756 675 Pfam Agenet domain 382 458 IPR008395 -
Bva01g01756 675 PANTHER AGENET AND BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 6 674 - -
Bva01g01756 675 SMART agenet_At_2 377 443 IPR014002 -
Bva01g01756 675 SMART agenet_At_2 464 522 IPR014002 -
Bva01g01756 675 ProSiteProfiles BAH domain profile. 159 276 IPR001025 GO:0003682
Bva01g01756 675 MobiDBLite consensus disorder prediction 561 575 - -
Bva01g01756 675 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 6 674 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01756 Bva-Chr1 18406247 18410362 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01756 389 520 PHD Transcription Factor Family AT5G58610 28.777 5.73e-06 47.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01756 01 18406247 18410362 Bva01g01756 01 18406247 18410362 ECH