Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01747 ATGTCGTCTAGGTTTGATTTGGAATTGGTTGGGGCTCCGTTGCAGCTCTGGATTTCTTGTGCTTCCTTGCTATTGTCTGTGTTCTCTGCTCTCTGCTGTATGCTACTCTGCTCTCCCGGGCAGAGCTTGAATCTGGGGAACCCAGCTGTTTCGATGCGTTTGAGGCCAGAAAGGACTTGTTCTGTAGGAGAGTGCGTTGGTGGATTTCACATAAACCGAGTCTTACAACCAGCAATTTCAATGAGCAATACCTACAAAAAGCACACACAGAAACAGAAGCCTCCCTTTCGGGACACCCAAATGGCGAGAAAGCTCCGGATCATCTGCTATGACCCGGATGCAACTGATTCATCTTCAAGCGAAGACGAAACTGAGACCAAACCCAGAAAACTCAAACGCATCGTTCGAGAATTGAGCCTTCCTCCTCTTTTTGCTGACAAACCTGCTTTTGAATCCGAGTCTTCAGCTCAAGACAGCAACAATGGAGCCCTTGACCCATCCGCTGAAGGTCAAACTCTCAGTAGGAAGAGAGCTTTGACCAGAATCCCATCAACGAGAAGACCCAGTGCTTCTAAGTACAGAGGTGTTCGACAGAGAAAATGGGGGAAATGGGCTGCTGAGATTCGTGACCCTTTCAAGGGTGCACGAATCTGGTTGGGAACTTACAATACCGCTGTGGAAGCATCCCGAGCATATGAGAATAAAAAGCAGGAATTCGAAAAAGCCATGGCCAAGGTTCAATCTGATAAGAGCAACAACGATTCTTCTGCTGTCATTCTTCCTTCTCGAAAGAGTAAAAATGTCCCTTACTCCATTGCTGCTTCTTACTCAGAGAAGTCTGTTGCTACCTCCGAGAACTCAGAGAGTGGGGTGTCTCACACTTCACCATCTTCTGTTCTTGAATTGGATACCTTGGCATCCAAAGCCAATGCCAATGTTAAGGCTTCAAGCAAGGAAGAACCTCTCGAACCTATTCCTGAGACTATTGATTTGCAGGCTGAATTTGCAGATCTGCAAATCCCGGATTTGAGCTTCCTGAGCATGCCGCCACCACCATCTGGTCCAATAGAAACAGACACTAGTCTTGCTCTCGAATTGGATTGGCTAATGTTCAAAGATATGTCGCAGggcttggatgattttggtgGCCTCGATGACTTCCAAATCTGTGGTTTTGACGAGAACGAGCCAAGTGAACTTCCTGATTTCGATTTTGATCTTGGTGCTGATGAGTTTGCTGGTTGGACTGAGGAGCCCCTCAATATACCATGcgcata 1277 0.4605 MSSRFDLELVGAPLQLWISCASLLLSVFSALCCMLLCSPGQSLNLGNPAVSMRLRPERTCSVGECVGGFHINRVLQPAISMSNTYKKHTQKQKPPFRDTQMARKLRIICYDPDATDSSSSEDETETKPRKLKRIVRELSLPPLFADKPAFESESSAQDSNNGALDPSAEGQTLSRKRALTRIPSTRRPSASKYRGVRQRKWGKWAAEIRDPFKGARIWLGTYNTAVEASRAYENKKQEFEKAMAKVQSDKSNNDSSAVILPSRKSKNVPYSIAASYSEKSVATSENSESGVSHTSPSSVLELDTLASKANANVKASSKEEPLEPIPETIDLQAEFADLQIPDLSFLSMPPPPSGPIETDTSLALELDWLMFKDMSQGLDDFGGLDDFQICGFDENEPSELPDFDFDLGADEFAGWTEEPLNIPCA 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01747 425 MobiDBLite consensus disorder prediction 150 194 - -
Bva01g01747 425 Gene3D AP2/ERF domain 191 247 IPR036955 GO:0003700|GO:0006355
Bva01g01747 425 ProSiteProfiles AP2/ERF domain profile. 192 249 IPR001471 GO:0003700|GO:0006355
Bva01g01747 425 SMART rav1_2 192 255 IPR001471 GO:0003700|GO:0006355
Bva01g01747 425 MobiDBLite consensus disorder prediction 279 298 - -
Bva01g01747 425 PRINTS Ethylene responsive element binding protein signature 193 204 IPR001471 GO:0003700|GO:0006355
Bva01g01747 425 PRINTS Ethylene responsive element binding protein signature 215 231 IPR001471 GO:0003700|GO:0006355
Bva01g01747 425 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Bva01g01747 425 Coils Coil 225 249 - -
Bva01g01747 425 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF119 82 425 - -
Bva01g01747 425 Pfam AP2 domain 191 240 IPR001471 GO:0003700|GO:0006355
Bva01g01747 425 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 82 425 - -
Bva01g01747 425 SUPERFAMILY DNA-binding domain 191 242 IPR016177 GO:0003677
Bva01g01747 425 MobiDBLite consensus disorder prediction 112 132 - -
Bva01g01747 425 MobiDBLite consensus disorder prediction 152 187 - -
Bva01g01747 425 CDD AP2 191 232 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01747 Bva-Chr1 18340664 18342240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01747 86 424 AP2-EREBP Transcription Factor Family AT1G68550 37.536 9.15e-45 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Bva01g01747 AP2 1.9e-10 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01747 01 18340664 18342240 Bva01g01747 01 18340664 18342240 ECH