Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01746 ATGCCTCCATTGTTGCCGGAATTCTCCAACTCCGTGAAGCTCAAGTATGTGAAACTTGGGTATCAATACCTTGTGAATCACATTATCACCCTCACTCTCATACCCATCATGGTTGGCATCTCTGTTGAGGTTCTTCGATTGGGCCCAGATGAAATTTTGAACCTTTGGAGGTCTCTGCAGTTTGATCTTGTCCAAATTCTCTGTTCTGCTATTCTGATAATCTTCATTGCCACTGTCTATTTCATGTCAAAGCCAAGAACTATCTATCTTGTTGAATATGCCTGCTTCAAGCCACCGGTCACGTGCCGTGTCCCTTTTGCTACCTTCATGGAACACTCGAGGCTCAACCTcaagaataatccaaagaGTGTTCAGTTTCAAATGAGGATTCTTGAGCGTTCTGGTCTTGGAGAAGAGACCAGTTTGCCCCCCGCGATTCATTATATTCCTCCGAAACCCACGATGGAAGCTGCCAGAGGGGAAGCTGAGCTTGTCATCTTCTCCGCCATGGAttctttgttcaagaaaacTGGGCTTAAGCCTAAGGATATTGATATTCTTATTGTGAATTGCAGCCTTTTCTCTCCAAccccttctctctctgccATGGTCATCAACAAGTACAAGCTCAGGAGCAACATCAAAAGCTTCAATCTTTCTGGGATGGGTTGCAGCGCAGGGTTGATTTCCATTGATTTAGCTCGTGATCTTCTTCAAGTTCATCCAAATTCAAATGCTGTGGTGGTGAGCACAGAGATCATCACCCCCAACTATTACCAGGGCAATGAAAGAGCCATGCTTCTTCCAAACTGTTTGTTCAGAATGGGTGGTGCTGCTATTCTCTTATCCAACCGGAGGTCCGAACGCCGGCGAGCCAAGTACAGATTGGTCCACGTGGTTCGAACCCACAAGGGGGCTGATGACAAAGCCTTTCGCTGTGTGTTCGAGGAAGAagacaaagaaggaaaagtgGGCATTAATCTCTCCAAAGACCTCATGGCCATAGCAGGGGAAGCTCTGAAATCCAATATCACAACCATTGGCCCTCTTGTTCTTCCTGCTTCAGAGCAATTACTCTTCCTTGTCACACTCATTGGCCGCAAAATTTTTAACCCAAAATGGAAACCATACATTCCAGACTTCAAGCAAGCTTTTGAGCACTTCTGCATCCATGCCGGCGGCAGAGCTGTAATTGATGAGCTGCAGAAGAACCTTCAGCTCTCCGCTGAGCATGTTGAAGCCTCAAGAATGACCCTTCACCGATTCGGCAACACCTCGTCATCTTCGCTCTGGTATGAGCTCAACTACATTGAATCTAAAGGAAGGATGAAGAAGGGAGATAGAGTTTGGCAGATAGCTTTTGGAAGTGGCTTCAAGTGTAACAGTGCGGTGTGGAAATGCAACAGAAGCATTAAGACCCTTGCTGATGGGCCTTGGGCAGATTGCATAGACAGATACCCAGTTCATATTCCTGAGATTGTTAAGCTCTA 1490 0.4423 MVGISVEVLRLGPDEILNLWRSLQFDLVQILCSAILIIFIATVYFMSKPRTIYLVEYACFKPPVTCRVPFATFMEHSRLNLKNNPKSVQFQMRILERSGLGEETSLPPAIHYIPPKPTMEAARGEAELVIFSAMDSLFKKTGLKPKDIDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISIDLARDLLQVHPNSNAVVVSTEIITPNYYQGNERAMLLPNCLFRMGGAAILLSNRRSERRRAKYRLVHVVRTHKGADDKAFRCVFEEEDKEGKVGINLSKDLMAIAGEALKSNITTIGPLVLPASEQLLFLVTLIGRKIFNPKWKPYIPDFKQAFEHFCIHAGGRAVIDELQKNLQLSAEHVEASRMTLHRFGNTSSSSLWYELNYIESKGRMKKGDRVWQIAFGSGFKCNSAVWKCNRSIKTLADGPWADCIDRYPVHIPEIVKL 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01746 460 SUPERFAMILY Thiolase-like 38 256 IPR016039 GO:0016746
Bva01g01746 460 PIRSF Very_long_ch_3-ktacl-CoA_syn 1 460 IPR012392 GO:0006633|GO:0016020|GO:0016747
Bva01g01746 460 SUPERFAMILY Thiolase-like 261 431 IPR016039 GO:0016746
Bva01g01746 460 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 348 430 IPR013747 -
Bva01g01746 460 Gene3D - 74 430 IPR016039 GO:0016746
Bva01g01746 460 PANTHER 3-KETOACYL-COA SYNTHASE 5-RELATED 1 459 - -
Bva01g01746 460 PANTHER 3-KETOACYL-COA SYNTHASE 1 459 IPR012392 GO:0006633|GO:0016020|GO:0016747
Bva01g01746 460 CDD CHS_like 37 429 - -
Bva01g01746 460 Pfam FAE1/Type III polyketide synthase-like protein 44 332 IPR013601 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01746 Bva-Chr1 18329221 18330711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01746 4 460 Miscellaneous Gene Families AT1G25450 83.151 0.0 829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01746 01 18329221 18330711 Bva01g01746 01 18329221 18330711 ECH