Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01743 ATGAGGATCAGCTGCAACGGCTGCCGGATACTCAGAAAAGGTTGCAGCGACAACTGCTCCATTAGACCCTGCCTTAGCTGGATCACCTCACCGGAAGCCCAATCCAACGCCACCCTCTTCCTCGCCAAGTTCTATGGCCGCGCCGGACTTCTCAACCTCATCAATGCAGCCCCGCACCACCTTCGCGCAGCTGTGTTCAAATCGTTGTTGTACGAGGCGAGTGGGAGGATTGTGAATCCGGTTAACGGGTCACTGGGTTTGCTCTGGACAGGGGACTGGGGACGGTGTCAAGCCGCCGTCGATGCGGTGCTCGCCGGGTCGGAGATTAAGGATGCTGTGCCGGATTTTGATTTGCAAGTGGGGAGTAAGCCTACTGTCATAGACTGCGGAGAATGCCACGTGGCGAAAGACTCTGACGTGGACAAAGGCAGTATCAACAAAGTGACGAAAGGCAGAGCCCGGTTTAAGATGTCCAGGGAAAGTAAAGTGATTAAACCAATAGCACGGGTGGGTTCGGTTGACTCGGATACGTTGGGTAGCTTGAATTTGCAACAGCAAAATAGTCGTTGGGAGAGGTCGGAGAGCGAGAGCTTGTTCTCTGGTGAAACCGTGGAGGCTATGCTGGTGAACCGGGATATTGAACCGGAGCAAGACCAGATGAGGCATGATGATGAGATTGGAGCTGATGAAACCGAGGTTGATTTGGAACTCACTCTTGGATA 722 0.5346 MRISCNGCRILRKGCSDNCSIRPCLSWITSPEAQSNATLFLAKFYGRAGLLNLINAAPHHLRAAVFKSLLYEASGRIVNPVNGSLGLLWTGDWGRCQAAVDAVLAGSEIKDAVPDFDLQVGSKPTVIDCGECHVAKDSDVDKGSINKVTKGRARFKMSRESKVIKPIARVGSVDSDTLGSLNLQQQNSRWERSESESLFSGETVEAMLVNRDIEPEQDQMRHDDEIGADETEVDLELTLG 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01743 240 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Bva01g01743 240 PANTHER LOB DOMAIN-CONTAINING PROTEIN 41-LIKE 1 240 - -
Bva01g01743 240 Pfam Lateral organ boundaries (LOB) domain 4 102 IPR004883 -
Bva01g01743 240 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01743 Bva-Chr1 18310930 18311948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01743 1 139 AS2 family AT3G02550 61.151 6.20e-61 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bva01g01743 LOB 5.3e-22 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01743 01 18310930 18311948 Bva01g01743 01 18310930 18311948 ECH