Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01718 ATGCCGGGCAAAGATGAGGGTGCCGATAAGGAGAAGTGCTTGGAGCGCTTTTTGAAGATCGGTTTGGACGAGCGGACTGCGAAAAACACCATTGCTAACAACAAAGTCACTGCCAATCTTACGGCTGTCATTGATGAGGCTGGTATTACTGATGGATGCGAGCGGAGTGTAGGGAATCTCCTGTACACGGTTGCTACAAAGTATCCGTCAAATGCCTTACTGCATCGTCCAACATTGCTGCAATACGTTATTTCCTTAAAGATAAAAACAACAGCACAGTTAGATGCAGCATTGGCCTTTCTTGCTGATACGGGTTTGGAGAAACTtgatttgaagaagtttgaagAATCTTGTGGTGTTGGTGTTGAGGtttcaaaggaagaaattgaacgAATTGTTAATGAAGTTTTTGAAGAGAATAAGGCTGCAATCCTGGAGCTGCGCTATCGCTTCAATGTGGGTGAGTTATTGGGGCACATTCGAAAGAGGCAGCCATGGGCTGATGGAAAAGTTGTCAAGCAACTCGTGGATTCAACATTATATGAGTTACTTGGTGAAAGGACTGCAGCAGATAATGAAAAACcttcaaaaaagaagaaagagaagccTGCTAAAGTAGAGACCGCACCTGTTCCTGCTCCAGAAAAGGCATCTGAAGAAGATCTAAATCCATATTCGATATTCCCTAATCCAGAGGAGAATTTAAAGGTACATACTGAAGTTCCTTTTAGTGATGGTAGCATCCTGAGATGTTGCAATACAAAGCAACTACTTGATAAACACTTAAAAGTAACAGGTGGGAAAGTTTTGACCCGCTTTCCACCTGAACCAAATGGATACCTGCATATTGGTCATGCCAAGGCAATGTTCATTGATTTTGGCTTGGCAAAAGATAGAGAGGGAGGCTGCTACTTGAGGTATGATGATACAAATCCTGAAGccgaaaagaaagaatatattgaTCACATTGAAGAAATTGTTGAGTGGATGGGTTGGAAACCGTTGAAGATCACTTACACAAGTGATTACTTCCAAGAATTGTATGAATTAGCAGTGGAGCTCATACGAAGAGGTCATGCATATGTTGATCATCAGACTCCTGATGAGATAAAAGAGTacagagagaagaaattgaacAGTCCTTGGAGGGATAGACCAATTGCAGAGTCATTGGAACTCTTTGAGGATATGAGACGTGGGCTTATTGAAGAAGGCAAAGCAACACTGAGAATGAAGCAAGATATGCAGAGTGATAACTTCAATATGTACGACCTTATTGCATACCGTATTAAGTTCACTCCACACCCTCATGCTGGAGACAAGTGGTGTATCTATCCGAGTTATGATTATGCTCACTGCATTGTGGATTCTCTTGAGAATATCACACATTCGCTATGTACGCTTGAATTTGAGACACGTCGTGCATCATACTATTGGTTGTTGCATGTGTTGGGCCTATACCAACCTTATGTGTGGGAATATTCAAGGCTGAATATCTCCAACACAGTTATGTCAAAGCGTAAGCTAAATCGTTTAGTGACAGGGAAGTGGGTTGATGGCTGGGATGATCCTCGCCTGATGACGCTAGCTGGTTTGCGTCGAAGAGGCATACCGCACACTGCAATCAATGCTTTTGTCAAAGGAATTGGGATCACTAGAAGTGATGGCACTTTGATATCTGTAGAACGCCTTGAGTATCATGTTAGGGAAGAACTGAACAGAACTGCTGATCGTGCAATGGTTGTTCTACACCCACTCAAGGTTGTTATTACCAACATGGAAGCCAACTCAACAATTGAGGTTGATGCAAAGAAGAAGCCTGATGCTCAAGATGATGATGCATCTGCCTTCTATAAGGTTCCATTTTCcaatgttatttatattgatagcTCAGATTTCCGGATCCAAGATTCAAAAGATTATTACGGTCTTGCTCCGGGTAAATCTGTAATACTCAGATATGCGTTTCCTATAAAGTGCACTGAAGTTATTCTTGCTGATGATAATGAGACTATTGTGGAAATCCGGGCTGAGTATGATCCTTCAAAGAAGACAAAGCCTAAGGGCGTTCTTCATTGGGTTGCTGGACCATCCCCAGGAGTTGATCCATTTAAGGTGGAAGTCAGGTTATTTGACAGGCTATTCCTTTCAGAGAATCCTGCTgaacttgacaattggcttggTGATCTAAACCCCAAATCCAAAGTGGTCGTGCCAAATGCATATGCTGTGCCTGCACTCCGGAATGCAGCAATTGGGCAAAGGTTCCAGTTTGAAAGATTAGGCTATTTTGTGGTGGACAAGGATTCCACTCCTGAGAATCTTGTTTTTAATCGGACGGTCACCCTAAAAGACAGTTATAGTAAAGGTGGGAAGTA 2378 0.402 MPGKDEGADKEKCLERFLKIGLDERTAKNTIANNKVTANLTAVIDEAGITDGCERSVGNLLYTVATKYPSNALLHRPTLLQYVISLKIKTTAQLDAALAFLADTGLEKLDLKKFEESCGVGVEVSKEEIERIVNEVFEENKAAILELRYRFNVGELLGHIRKRQPWADGKVVKQLVDSTLYELLGERTAADNEKPSKKKKEKPAKVETAPVPAPEKASEEDLNPYSIFPNPEENLKVHTEVPFSDGSILRCCNTKQLLDKHLKVTGGKVLTRFPPEPNGYLHIGHAKAMFIDFGLAKDREGGCYLRYDDTNPEAEKKEYIDHIEEIVEWMGWKPLKITYTSDYFQELYELAVELIRRGHAYVDHQTPDEIKEYREKKLNSPWRDRPIAESLELFEDMRRGLIEEGKATLRMKQDMQSDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSLENITHSLCTLEFETRRASYYWLLHVLGLYQPYVWEYSRLNISNTVMSKRKLNRLVTGKWVDGWDDPRLMTLAGLRRRGIPHTAINAFVKGIGITRSDGTLISVERLEYHVREELNRTADRAMVVLHPLKVVITNMEANSTIEVDAKKKPDAQDDDASAFYKVPFSNVIYIDSSDFRIQDSKDYYGLAPGKSVILRYAFPIKCTEVILADDNETIVEIRAEYDPSKKTKPKGVLHWVAGPSPGVDPFKVEVRLFDRLFLSENPAELDNWLGDLNPKSKVVVPNAYAVPALRNAAIGQRFQFERLGYFVVDKDSTPENLVFNRTVTLKDSYSKGGK 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01718 792 Gene3D - 8 122 IPR042558 -
Bva01g01718 792 Gene3D HUPs 244 579 IPR014729 -
Bva01g01718 792 Pfam Glutaminyl-tRNA synthetase, non-specific RNA binding region part 2 172 241 IPR007638 GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425
Bva01g01718 792 Gene3D Ribosomal Protein L25; Chain P 580 698 IPR020056 -
Bva01g01718 792 TIGRFAM glnS: glutamine--tRNA ligase 269 789 IPR004514 GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425
Bva01g01718 792 Pfam tRNA synthetases class I (E and Q), anti-codon binding domain 576 767 IPR020059 GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418
Bva01g01718 792 SUPERFAMILY Nucleotidylyl transferase 268 582 - -
Bva01g01718 792 ProSitePatterns Aminoacyl-transfer RNA synthetases class-I signature. 275 286 IPR001412 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Bva01g01718 792 MobiDBLite consensus disorder prediction 190 206 - -
Bva01g01718 792 MobiDBLite consensus disorder prediction 190 223 - -
Bva01g01718 792 PANTHER GLUTAMINE-TRNA LIGASE 12 791 - -
Bva01g01718 792 Pfam tRNA synthetases class I (E and Q), catalytic domain 268 573 IPR020058 GO:0004812|GO:0005524|GO:0043039
Bva01g01718 792 PANTHER OS05G0182800 PROTEIN 12 791 - -
Bva01g01718 792 CDD GlnRS_core 268 578 - -
Bva01g01718 792 Gene3D Ribosomal Protein L25; Chain P 701 785 IPR020056 -
Bva01g01718 792 SUPERFAMILY Ribosomal protein L25-like 576 786 IPR011035 GO:0006412
Bva01g01718 792 PRINTS Glutamyl-tRNA synthetase signature 446 456 IPR000924 GO:0000166|GO:0004812|GO:0005524|GO:0043039
Bva01g01718 792 PRINTS Glutamyl-tRNA synthetase signature 272 284 IPR000924 GO:0000166|GO:0004812|GO:0005524|GO:0043039
Bva01g01718 792 PRINTS Glutamyl-tRNA synthetase signature 301 314 IPR000924 GO:0000166|GO:0004812|GO:0005524|GO:0043039
Bva01g01718 792 Pfam Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 11 169 IPR007639 GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418
Bva01g01718 792 Gene3D - 123 192 IPR042559 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01718 Bva-Chr1 18166230 18174382 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01718 01 18166230 18174382 Bva01g01718 01 18166230 18174382 ECH