Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01713 atggaGGATCAACTTGACTGCCAGAGCAAAAGAGCAAACCCCACAACCACCACACGCTTAAAGCTCTTTGGTTTCAGCGTTCAGGAGGAACATATGGAAGATGAAGTGCTTGAAGATGTAGCTGACTCAATTACCAAGGCCACTTCCCCATCTGGGTCGCCGGATTCCGGTCGTGGGTGTGCCGATGGCGGCGGCGGCGGTGGTGGCGGCGCGTTCCCAGCTTCATCAGGTGACAGAAAGTACGAGTGTCAGTACTGTTGCCGCGAGTTTGCGAATTCACAAGCACTTGGTGGGCATCAGAACGCGCACAAGAAAGAGCGTCAGCAGCTAAAGCGAGCTCAGCTACTAGCAACACGGAACGCTGCCGTTTCATTCGTGCGAAACCCGATAATCTCCGCCTTTGCTCCGCCTCCGCACCTGCTAGCTCAGCCGGGACCGGTGGTGGTTCCGGGACCGCCACCTTCGTGGGTTTACGTGCCGCAACGTGCTGCGCCTCCTCCCTTCCACGTATCTCACGGCTGCGTGTTCCCGTCGGCGAATAATACGAGCAATTACAGTTGTAATAATTCCGTTGGAAGATCTGCAGGTGCAGGAATGCTATCATACGGTGCCGGTGTAGCGGATTCATCGTCCACATGGTCTACTATGGGTTCCCAAGTACACGCCCGGGTCCACGGGAGAGTCGACGGGCCTTCTTTGAGCAGGTTGTCAAAAGCAGATGCGGGCCCCAATTTTGACGATTCACTGGGCTTAGACTTACATCTTAGTCTTGCGCCGGCTGCGCCGTG 788 0.5571 MEDQLDCQSKRANPTTTTRLKLFGFSVQEEHMEDEVLEDVADSITKATSPSGSPDSGRGCADGGGGGGGGAFPASSGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLLATRNAAVSFVRNPIISAFAPPPHLLAQPGPVVVPGPPPSWVYVPQRAAPPPFHVSHGCVFPSANNTSNYSCNNSVGRSAGAGMLSYGAGVADSSSTWSTMGSQVHARVHGRVDGPSLSRLSKADAGPNFDDSLGLDLHLSLAPAAP 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01713 262 SUPERFAMILY beta-beta-alpha zinc fingers 77 108 IPR036236 -
Bva01g01713 262 PANTHER ZINC FINGER PROTEIN GIS3 10 262 - -
Bva01g01713 262 Gene3D Classic Zinc Finger 73 128 - -
Bva01g01713 262 ProSitePatterns Zinc finger C2H2 type domain signature. 83 103 IPR013087 -
Bva01g01713 262 PANTHER ZINC FINGER PROTEIN 5 10 262 IPR044299 GO:0010090
Bva01g01713 262 ProSiteProfiles Zinc finger C2H2 type domain profile. 81 108 IPR013087 -
Bva01g01713 262 MobiDBLite consensus disorder prediction 38 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01713 Bva-Chr1 18132359 18133452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01713 3 260 C2H2 Transcription Factor Family AT1G68360 49.084 2.06e-60 189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01713 01 18132359 18133452 Bva01g01713 01 18132359 18133452 ECH