Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01712 ATGGGTTCCAAAATGGAAGGACCGTCTACCCCAGCAATTCGACGAGACCCATATGAGGTATTGTCTGTGTCAAGGGACTCAACTGACCAGGAGATAAAAACGGCTTACAGAAAGCTCGCTCTCAAATACCACCCTGACAAGAATGCCAGCAATCCTGAAGCTTCAGAATTATTTAAAGAGGTTGCATATTCATATAGTATCTTATCTGACCCAGAGAAGAGAAGGCAATATGACAGTGCAGGATTTGaggCACTTGATGCTGATAGCATGGACATGGAAATTGACTTATCTAATCTTGGAACTGTCAACACAATGTTTGCAGCTTTATTCAGCAAGCTAGGTGTCCCTATCAAGACAACCATTTCAGCTAATGTTCTTGAAGAAGCTCTGAATGGCACAGTTACAGTCAGACCCCTTCCAATTGGAACATCAGTTAGTGGAAAGGTAGAGAAGCAATGTGCTCATTTTTTTGGTGTGACAATAAATGAGCAGCAGGCTGAGTCAGGAATTGTAGTAAGAGTCACTTCAGGTGCACAAAGCAAATTCAAGCTGCTCTACTTTGAACAAGATGTAAACGGTGGCTATGGTTTGGCATTGCAGGAGGATAGTGAGAAGACTGGCAAGGTGACGTCTGCAGGAATGTATTTCTTACATTTCCAAGTGTACAGAATGGATTCAACTGTAAATGCGtTGGCAATGGCTAAGGATACTGAAGCTGCCTTTTTCAAAAGGTTGGAGGGTCTTCAACCATGTGAAGTTTCAGAGCTAAAGCCTGGCACTCATATATTTGCTGTTTACGGAGATAACTTCTTTAAGACTGCTACTTACACAATTGAGGCAATTTGTGCAAAATCATATGAGGAGACCACCCATAAACTCAAAGACATCGATGctcaaattttaagaaagagGAATGAGCTACGCCAATTTGAAACAGAATATAGAAGGGCATTGGCACGTTATCAAGAAGTGACCGAAAGATACACTATAGAAAAACAGTGTGTAGATGAACTTCTCAAACAGAGAGACAGTATCCATTCTTCATTCACGGTAGCCAGGTCAATCAATATTAGTGGGAGTAACGGTAATTTAAGTAATGGAAGTACTAGCAAAGTTACAGGTGAAGATCCTAGAGTAGAGAGTCCTGGAGAAGATGGAGGATCAGCAGATGGCAAGGATAAAtcagggaaaaagaaatggtttAATCTCAATCTTAGGGGTTCTGATAAGAAGTTAATCTG 1241 0.3997 MGSKMEGPSTPAIRRDPYEVLSVSRDSTDQEIKTAYRKLALKYHPDKNASNPEASELFKEVAYSYSILSDPEKRRQYDSAGFEALDADSMDMEIDLSNLGTVNTMFAALFSKLGVPIKTTISANVLEEALNGTVTVRPLPIGTSVSGKVEKQCAHFFGVTINEQQAESGIVVRVTSGAQSKFKLLYFEQDVNGGYGLALQEDSEKTGKVTSAGMYFLHFQVYRMDSTVNALAMAKDTEAAFFKRLEGLQPCEVSELKPGTHIFAVYGDNFFKTATYTIEAICAKSYEETTHKLKDIDAQILRKRNELRQFETEYRRALARYQEVTERYTIEKQCVDELLKQRDSIHSSFTVARSINISGSNGNLSNGSTSKVTGEDPRVESPGEDGGSADGKDKSGKKKWFNLNLRGSDKKLI 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01712 413 Coils Coil 293 327 - -
Bva01g01712 413 MobiDBLite consensus disorder prediction 377 400 - -
Bva01g01712 413 PRINTS DnaJ domain signature 18 36 IPR001623 -
Bva01g01712 413 PRINTS DnaJ domain signature 53 73 IPR001623 -
Bva01g01712 413 PRINTS DnaJ domain signature 73 92 IPR001623 -
Bva01g01712 413 PRINTS DnaJ domain signature 36 51 IPR001623 -
Bva01g01712 413 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Bva01g01712 413 MobiDBLite consensus disorder prediction 360 400 - -
Bva01g01712 413 SUPERFAMILY Chaperone J-domain 15 86 IPR036869 -
Bva01g01712 413 PANTHER CHAPERONE PROTEIN DNAJ 15-LIKE 2 411 - -
Bva01g01712 413 Pfam DnaJ domain 16 78 IPR001623 -
Bva01g01712 413 Gene3D DnaJ domain 4 98 IPR036869 -
Bva01g01712 413 MobiDBLite consensus disorder prediction 360 375 - -
Bva01g01712 413 ProSiteProfiles dnaJ domain profile. 16 81 IPR001623 -
Bva01g01712 413 CDD DnaJ 16 70 IPR001623 -
Bva01g01712 413 SMART dnaj_3 15 73 IPR001623 -
Bva01g01712 413 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 2 411 - -
Bva01g01712 413 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01712 Bva-Chr1 18115969 18121227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01712 9 88 C2H2 Transcription Factor Family AT1G74250 42.353 7.06e-13 68.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01712 01 18115969 18121227 Bva01g01712 01 18115969 18121227 ECH