Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01709 ATGGCGGCACCTTCTCGTTTTCTTCTTCCCCTGAGcttcttctctttgattttccaCTTACTTCTTCTCTCTCATGGCTATGAAAATCCAGATTTACAAGCTCTCTTGGCTTTCAAATCTGCTTCGGATACATACGGAAAGCTCTCGACTTGGAACTCCAGCACTGACCTTTGTACCTGGTCCGGCGTCTCGTGCTTCCAGAACCGAGTCTCGCGACTCGTCCTTGAGAATCTCTACCTCTGTGGCTCTTTCGAACCCTTAACAGCTCTCACTCAGCTCCGagttttgagtttgaaaaGAAACCGGCTTTCGGGTCCCATTCCGAGCCTGGCTAATTTCACAGCTCTGAAGCTTCTGTTTCTGTCTTACAATGAGTTTTCCGGCGATTTCCCGGCGAGTATTACCAATCTTTCTCGGTTGTACCGTCTTGATCTGTCCCATAACAACTTGTCCGGTAGCATTCCAGCTTCGGTCAACCATTTGACCCACCTCCTCACTCTTCGTCTCGACGGGAACGGGTTCTCGGGTCACATTCCTGCTCTGAATCTCCCTGATCTCCAAGACTTCAATGTCACCGGTAACCGCCTCTCCGGTGAAGTACCCAAATCGTTATCAGCTTTCCCAGAATCCGCTTTCGGACAAAATCCATCTCTCTGTGGACCCCCACTTCAGCTCTGTAAGGATATTGTGGCGGACCCAAGCAAACCGGGATCTGAGGGAGCCATTGCGTCGCCATTAATGCCCCGCGGCAACGCACCAACAACAGTTTCATCGTCTCCAAGCTCAATGCCGGGAAACGAAGCAATATCCAGTACCAAGCCAAAAACTAAACACGAAAGTAGTTCAACAAAAATAAGCCCATTTGCTCTGATCGCCATTATAGTAGGTGACGTTCTGGTTCTGGCCTTGATCTCTCTGCTTCTCTACTGGTACTTCTGGCGAAACTACTCTGCAAAATTGAAGGAGGGAAAAAGTTCCAAGCTTCTCGAGAGCGAAAAGATAGTGTATTCTTCGAGTCCATACCCGGCGCAATCCGGTTTGGAGAGGGGGAAAATGGTGTTCTTCGAAGGGGTGAAAAGGTTTGAGCTTGAGGACTTGCTTCGTGCCTCTGCAGAAATGCTGGGAAAAGGCGGGTTTGGAACGGCATACAAAGCAGTGCTTGATGATGGAAACGTCGTCGCAGTTAAGAGGCTCAAGGATGCTCAGATTGGAGGGAAGAGAGAGTTTGAGCAGCACATGGAAGTTCTGGGAAAGTTAAGGCATCCAAACATTGTCAGCTTGAGAGCTTACTATTTTGCAAGAGAGGAGAAGTTGCTGGTCTATGATTACATGCCCAATGGTAGCTTGTTCTGGCTCCTTCATGGTAACCGGGGACCCGGAAGAACCCCACTGGACTGGACCACCCGACTCAAAATAGCAGCTGGAGCGGCCCGGGGTCTGGCCTTCATACACAACTCATGCAAGGGTCTTAAACTCACCCACGGTAACATCAAATCCACCAACATTCTATTGGACAAAACTGGGAACGCACACGTGTCAGATTTTGGGCTCTCCATCTTTGCGAGCCCAACGTCAGCAGCAGCTCCGAGATCCAACGGCTACCGTGCACCGGAGGCATTGGACGGTCGGAAACACACTCAGAAATCTGACGTGTACTCGTTCGGTGTTCTTCTCCTGGAGTTGCTCACAGGGAAGTGCCCCTCCTTGGTGGACAGTAGTATTAGTGGGTCCGGGAGCGGCTATGGTGGGGTCGTGGATCTGCCTAGGTGGGTCCAATCTGTGGTGAGAGAGGAATGGACGGCTGAGGTGTTTGATCTGGAGCTGATGAGGTACAAGGATATTGAGGAAGAGATGGTGGGGCTGCTTCAGATTGCTATCACCTGCACCGCGGCTGCACCCGATCAACGGCCTAGAATGAACCACGTGGTCAAGATGATTGAAGAGATCCGTGGGGTTGAAGTGTCACCGGGTCATGACTCGTTGGACTCTGAGTCACCTTCCTTGTCTGAGGACACGTGCGGAGCTAGTCAGTA 2033 0.5022 MAAPSRFLLPLSFFSLIFHLLLLSHGYENPDLQALLAFKSASDTYGKLSTWNSSTDLCTWSGVSCFQNRVSRLVLENLYLCGSFEPLTALTQLRVLSLKRNRLSGPIPSLANFTALKLLFLSYNEFSGDFPASITNLSRLYRLDLSHNNLSGSIPASVNHLTHLLTLRLDGNGFSGHIPALNLPDLQDFNVTGNRLSGEVPKSLSAFPESAFGQNPSLCGPPLQLCKDIVADPSKPGSEGAIASPLMPRGNAPTTVSSSPSSMPGNEAISSTKPKTKHESSSTKISPFALIAIIVGDVLVLALISLLLYWYFWRNYSAKLKEGKSSKLLESEKIVYSSSPYPAQSGLERGKMVFFEGVKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGNVVAVKRLKDAQIGGKREFEQHMEVLGKLRHPNIVSLRAYYFAREEKLLVYDYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHNSCKGLKLTHGNIKSTNILLDKTGNAHVSDFGLSIFASPTSAAAPRSNGYRAPEALDGRKHTQKSDVYSFGVLLLELLTGKCPSLVDSSISGSGSGYGGVVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQIAITCTAAAPDQRPRMNHVVKMIEEIRGVEVSPGHDSLDSESPSLSEDTCGASQ 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01709 677 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 24 665 - -
Bva01g01709 677 SUPERFAMILY Protein kinase-like (PK-like) 372 647 IPR011009 -
Bva01g01709 677 Gene3D Transferase(Phosphotransferase) domain 1 444 660 - -
Bva01g01709 677 ProSiteProfiles Protein kinase domain profile. 368 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01709 677 MobiDBLite consensus disorder prediction 236 280 - -
Bva01g01709 677 SUPERFAMILY L domain-like 48 224 - -
Bva01g01709 677 Gene3D Ribonuclease Inhibitor 24 87 IPR032675 -
Bva01g01709 677 CDD STKc_IRAK 374 649 - -
Bva01g01709 677 MobiDBLite consensus disorder prediction 660 677 - -
Bva01g01709 677 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Bva01g01709 677 Pfam Protein kinase domain 372 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01709 677 MobiDBLite consensus disorder prediction 654 677 - -
Bva01g01709 677 PANTHER - 24 665 - -
Bva01g01709 677 Gene3D Phosphorylase Kinase; domain 1 344 443 - -
Bva01g01709 677 MobiDBLite consensus disorder prediction 250 271 - -
Bva01g01709 677 Gene3D Ribonuclease Inhibitor 88 231 IPR032675 -
Bva01g01709 677 Pfam Leucine rich repeat 115 173 IPR001611 GO:0005515
Bva01g01709 677 ProSitePatterns Protein kinases ATP-binding region signature. 374 396 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01709 Bva-Chr1 18093721 18096682 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01709 31 676 Receptor kinase-like Gene Family AT1G68400 67.474 0.0 850
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bva01g01709 Pkinase 7.5e-38 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01709 01 18093721 18096682 Bva01g01709 01 18093721 18096682 ECH