Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01700 ATGGCCTCCGGCGAAGGGAGGCGTCGTCATCATGAGCTTGTGCCTCTTGCTGCGTTGATAAGCAGAGAGATGAAGAGTGAGAAAATGGAGAAGCCCACTGTGAGGCATGGATATGCTGCTCAGTCTAGGAAAGGGGAAGATTACTATCTAATTAAGACAGATTGTCAGCGAGTGCCTGGGAATTCTTCATCAACTTTTTCTGTATTTGCGATCTTTGATGGACACAATGGAAATGCTGCAGCCATTTACTCCAGGGAGCATTTGTTAAATCATGTCTTGAGTGCTATTCCTCGAGGACTTGGACGAGATGAATGGCTTCACGCATTACCTCGGGCATTGGTTGCTGGGTTTGTGAAGGCTGACAAGGAATTCCAGAGCAGAGGTGAAACTTCTGGAACCACTGCTACGTTTGTTATAGTTGATAGATGGACAGTAACAGTTGCATCTGTTGGAGATTCCCGTTGCATTCTAGACACTCAGGGTGGTGCTGTCACAACTTTAACTGTTGATCACAggcttgaagaaaatattgaagaGAGGGAACGTGTTACTGCCAGTGGAGGTGAGGTTGGGAGGCTTAGCGTTGTTGGTGGTGCTGAGATTGGTCCCCTCCGATGTTGGCCAGGTGGTCTATGCCTTTCTCGGTCAATAGGAGACATGGATGTCGGGGAGTTTATTGTACCGATACCATATGTCAAACAAGTGAAGCTATCAAAAGCAGGCGGGAGGCTTGTAATTGCCTCTGATGGCATCTGGGATGCTCTATCCTCAGAAATGGCTGCTAAATCTTGTCGGGGTTTGCCTGCTGAACTTGCTGCCAAGCAGGTTGTGAAGGAAGCTTTGAGGACAAGGGGCTTGAAAGATGATACAACTTGCATAGTAGTTGACATAATTCCTCCAGATAATGTATTGCCGCTGCCACCACCTCCCCCCAAAAAGCATAACAAATTGAGAGCTCTGCTGTTCAGGAAGAAGTCCCGTGATTCTGCCAGTAAATTGTCAAAGAAGCTTTCAGCTGTAGATATAGTGGAGGAACTGTTTGAAGAAGGATCTGCAATGCTTGCTGAAAGACTAGGAAATGATGAGAACACGGGGCAATCAACATCTGGGCTTTTCGTGTGTGCGGTATGCCAAGTAGATCTTGCTCCAAGTGAGGGCATCTCAGTTCATGCTGGTTCCATCTTCTCCACCAGCGCGAAGCCCTGGCAAGGGCCTTTTCTCTGTGCTGATTGTCGGGACAAGAAGGATGCTATGGAAGGAAAACGTCCTAGTGGAGTTAAAGTGTCATA 1289 0.4678 MASGEGRRRHHELVPLAALISREMKSEKMEKPTVRHGYAAQSRKGEDYYLIKTDCQRVPGNSSSTFSVFAIFDGHNGNAAAIYSREHLLNHVLSAIPRGLGRDEWLHALPRALVAGFVKADKEFQSRGETSGTTATFVIVDRWTVTVASVGDSRCILDTQGGAVTTLTVDHRLEENIEERERVTASGGEVGRLSVVGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPIPYVKQVKLSKAGGRLVIASDGIWDALSSEMAAKSCRGLPAELAAKQVVKEALRTRGLKDDTTCIVVDIIPPDNVLPLPPPPPKKHNKLRALLFRKKSRDSASKLSKKLSAVDIVEELFEEGSAMLAERLGNDENTGQSTSGLFVCAVCQVDLAPSEGISVHAGSIFSTSAKPWQGPFLCADCRDKKDAMEGKRPSGVKVS 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01700 429 CDD PP2Cc 34 297 IPR001932 -
Bva01g01700 429 PANTHER ALPHABET, ISOFORM E-RELATED 2 428 - -
Bva01g01700 429 SMART PP2C_SIG_2 51 297 IPR001932 -
Bva01g01700 429 SMART PP2C_4 25 295 IPR001932 -
Bva01g01700 429 Gene3D - 36 301 IPR036457 -
Bva01g01700 429 ProSiteProfiles PPM-type phosphatase domain profile. 28 297 IPR001932 -
Bva01g01700 429 SUPERFAMILY PP2C-like 41 297 IPR036457 -
Bva01g01700 429 PANTHER PROTEIN PHOSPHATASE 2C 15-RELATED 2 428 - -
Bva01g01700 429 Pfam Protein phosphatase 2C 61 282 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01700 Bva-Chr1 18013095 18016705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01700 1 428 PP2C-type Phosphatase Gene Family AT1G68410 80.505 0.0 711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01700 01 18013095 18016705 Bva01g01700 01 18013095 18016705 ECH