Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01693 ATGGTTCGAGTTAATGCATTTTACATTCTCCTATTCTCTCAACTTTTGTCGCTTCTCTCCACTGGAGAGGGCCATGAAAAGTGTCCGTCCTCATTTAACTGTGGTTATCTTGAGACAATCCAGTTCCCATTCACCACCATAGAACGCCCAGACTGCGGCATATTGGCTTTACATGGTTGTGGTAATGATTCAGTGTCTTCGAAAGGGATCCAACTAAAGAAAGGAGAACGGTATCATGTTATGCACATCGATCATTCTACCATTTTTGTCAGAGACGACCATCTTCACAAACTTTTGCAATCCAGATCTTGTGAAATCTTCAACAGTAATTATACTCCAAATCTTCCCCCTACCTCTCCTTTAGCTTCTTTTGACGTGAAGTACAATATAACCCTGTTCAAATGTAACAAATCTCTTCATATTCCCCAGCCCAAACTTTCCTTTAATTACGCAAACTGTTCCAACTACAATATCTACTACTTCCCTAGAGAATTTGAACTGCCCATGAGCAACAAGCCGCCGCCCAAAGCTTTTGCAGAATGCTCAATACTTCAGCTTCCAGTTAAAGATGAGGATGATAGTAACGatccttttacatttttaagtgCTGAGGTCCCTATTAAAGTACGATTCTCTGAAGAATGTGCCAAGTGTTACTATCATGAAAGAGGCATGTGTCAACTTGACAGCAGAAGAAAGTTTCTTTGCGTCAAAGATGATAGAAGTTGGGTTCGGAAGCTGGGAATAGGTATAGGTTTTGGAATCCTCTTCATCCTGATAGTTGTGTTCATATTACTGCGCTATAAACAAGAATTCCAACTTCAATCGAGAAACAACTCTGCTCATCACTTTCTAGACCCTGAGAGTCGTAATAGCTACTTTGGGGTCATTGTCTTCTCCTATGAGGAGCTTGAAGAAGCTACAAACAATTTTGATCGGAGCAAAGAACTTGGAGATGGAGGCTTTGGGACTGTTTACCATGGGAAACTTCGAGATGGACGTGAAGTTGCTGTGAAGCGCTTATATGAGCACAATTACAAGCGAGTAGAGCAGTTCATGAATGAAATTGCGATCCTTACTCGCTTACGCCACAGAAACCTTGTGTCTCTTTATGGCTGCACTTCACGTCACAGCCGTGGACTGCTGCTTGTGTATGAATTTATTCCAAATGGGACAGTTGGTTTTCATCTCCGTAGTCATTTAGCAAAGAGCAGGTTACTGTCATGGCATATCCGATTGAAAATTGCTGTAGAGACTGCTACTGCATTGGCATATCTCCATGCTTCTGACATCATTCATCGTGATGTGAAGTCCAACAATATTCTACTTGACAATTATTATTGCGTTAAAGTTGCTGATTTTGGGCTTTCAAGACTCTTCCCAAATGATGTTACTCATGTTTCCACAGCTCCACAAGGAACCCCAGGTTATGTTGATCCTGAGTATCACCAATGCTACCAGCTTACTAGTAAGAGTGATGTTTATAGCTTTGGAgttgttctcgttgagctaaTATCATCTAAGCCAGCAGTTGATATGAGCAGGCACAAGGATGAGATTAATTTGGCAAATCTAGCCCTCAAGAAGATCCAAAAAAGTGCTTTGAGTGAGCTGGTGGACCCTTCCCTTGGTTTTCACTCAGATGATGAAATTAAAAGGATGATAACTTCTACGGCAGAATTGGCTTTTCATTGTTTGCAACCAGACAAGGAATTGAGACCTTCCATGGATGAAGTTTTGAAGGTTCTCAAGAGAATTCAAAGTGGGAAAAATGAGGCTGAGTATCTAGAGGAAGCATGTGTTCATGATGCAGAGATGTCAAATGGAAGTGTGCAGTCATTACGGCCAGCCTCATTGGATTTGGATGGCGTTGGTCTGTCGAAAAATATGAAGATAGCATCATCACCAAAAACTGTGACAGATAGCTGGGATAGTAAATCTACTACTCCGAATGTCAGTAgttg 1964 0.4058 MVRVNAFYILLFSQLLSLLSTGEGHEKCPSSFNCGYLETIQFPFTTIERPDCGILALHGCGNDSVSSKGIQLKKGERYHVMHIDHSTIFVRDDHLHKLLQSRSCEIFNSNYTPNLPPTSPLASFDVKYNITLFKCNKSLHIPQPKLSFNYANCSNYNIYYFPREFELPMSNKPPPKAFAECSILQLPVKDEDDSNDPFTFLSAEVPIKVRFSEECAKCYYHERGMCQLDSRRKFLCVKDDRSWVRKLGIGIGFGILFILIVVFILLRYKQEFQLQSRNNSAHHFLDPESRNSYFGVIVFSYEELEEATNNFDRSKELGDGGFGTVYHGKLRDGREVAVKRLYEHNYKRVEQFMNEIAILTRLRHRNLVSLYGCTSRHSRGLLLVYEFIPNGTVGFHLRSHLAKSRLLSWHIRLKIAVETATALAYLHASDIIHRDVKSNNILLDNYYCVKVADFGLSRLFPNDVTHVSTAPQGTPGYVDPEYHQCYQLTSKSDVYSFGVVLVELISSKPAVDMSRHKDEINLANLALKKIQKSALSELVDPSLGFHSDDEIKRMITSTAELAFHCLQPDKELRPSMDEVLKVLKRIQSGKNEAEYLEEACVHDAEMSNGSVQSLRPASLDLDGVGLSKNMKIASSPKTVTDSWDSKSTTPNVSS 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01693 654 Gene3D Phosphorylase Kinase; domain 1 286 387 - -
Bva01g01693 654 SMART serkin_6 311 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01693 654 MobiDBLite consensus disorder prediction 635 654 - -
Bva01g01693 654 ProSitePatterns Protein kinases ATP-binding region signature. 317 339 IPR017441 GO:0005524
Bva01g01693 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 431 443 IPR008271 GO:0004672|GO:0006468
Bva01g01693 654 Gene3D Transferase(Phosphotransferase) domain 1 388 601 - -
Bva01g01693 654 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 7 653 - -
Bva01g01693 654 SUPERFAMILY Protein kinase-like (PK-like) 292 586 IPR011009 -
Bva01g01693 654 Pfam Protein kinase domain 312 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01693 654 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 7 653 IPR044652 -
Bva01g01693 654 ProSiteProfiles Protein kinase domain profile. 311 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01693 Bva-Chr1 17976106 17978896 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01693 32 654 Receptor kinase-like Gene Family AT1G25390 46.729 5.89e-173 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Bva01g01693 Pkinase 3.5e-49 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01693 01 17976106 17978896 Bva01g01693 01 17976106 17978896 ECH