Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01690 ATGACTTCTGTTTATATGTTTGGcttcttgatattttctttcctcgTGCAACTCTTCTCGGCTGTGAATGGGCACCGAGGACATTGTCCACCTTCATTTAACTGTGGATATCTTGAGAAGATCCAATTCCCTTTCACAAAAGCAGAACAACCCAACTGTGGTATATTTCCAATACAGAATTGTGATGATCCCAGGGCAGCGAAAAAAATCCAACTAGAGAATCAAGGAAAACAGTTTGTGGTTATACATGTTAGTCAGTCTTCCCAATATAGGATTTCAATTAGAGACGAGAATCTCTACCGGTCTCTGCAATCCAGAAGCTGTAATCGTTTAAGCCATAATTACACTCTTCCTATCAGTTCGCCTTTGGCTTCTTTTCAGATTTTGTATAATGTAATCATGTTCAAATGCAACCGCAACCTCAATGTCAAAACTCCTGCAAATCTgggaattttaaattattcatgtGGTAACTACGATATTTATTACAGCCCTCTAATCAATGAGTCCCGAAACTATTTCACAGCATGTTCAGTGGTCCAGCTTCCAGTTAAAGACCTGCCTGATGCCAAAGATCCATTCACATTTGTAACTGCTGAGATCCCCGTCGAAGTAACATTATCCCCGGATTGTACAAATTGTCGCAAGAAAAAAGGCCAGTGCCGACTTGACAGGAATGAGACGTTTTATTGTGAAGGGGACAATAGGTCGGATTTGAAGGTGAAACTAGGTTTAGCTATTGGGCTCTCAAGCATCTTGGTAATTGGGTTGCTCATTCTACTTGCCTATAAAAGAACATGTGTCCCCTCAGATTCCCACTTCCCTTCAAGACACACCAGTGCTGACCCTTACTCAAATATTGACCCAGAAAGTGGTGGTGTCTACTTTGGGGTTCCCCTATTCTCCTACAAGGAGCTTCAAGAAGCAACCAACAATTTTGACAGTACTAGAAAGCTTGGAAATGGAGGCGTTGGGACAGTATATTATGGAGAACTGCTAGATGGTAGGGAAGTTGCCATCAAGCGTTTATATGATCACAATAACAGAAGGGTAGAGCAGTTCATGAATGAAATTGAGATCCTCACTCGCTTGCGCCACAAAAATCTTGTGGCCCTCCATGGCTGCACATCACGTTACAGCCATGAACTACTGCTTGTGTACGAATACATTCCAAAGGGTACTCTTGCTTCCCATCTCCATGACGTAATACACCGCGATGTGAAAACTAACAATATCCTCCTTGACAATAATTTAAGTGTTAAAGTGGCTGATTTTGGACTTTCAAGACTTTTCCCTAACGATGTCACCCATGTGTCTACAGCACCACAAGGAACTCCAGGTTATGTTGATCCAGAATATCACCAATGCTACCAACTTACCAGCAAGagtgatgtttatagttttggagttGTACTCATTGAACTAATATCATATATGCTAGCCGTTGATATGAGCAGGCACAAGGATGAGATAAACTTGGCAAATCTAGCGATAAAGAAGATTCAAAGATGGGCATTAAATGAGCTTGTAGATCCTTGCCTTAATTTTGAGTCAGATAATGAAGTTAGAAGGATGATAGTTTCAGTTGCAGGAGTGGCTTTTCAGTGTTTACAACAGGAGAAGGAGTTGAGGCCTACCATGGATGAGGTTTCGGAGGCGCTGGGGAGAATTGCAAGTGGAGAGGATGAGCATGAATATCTAGAGGAACCATCTCCTGATGATGAAGTTGGCTTACTGAAGAATATGAAGCAACCAGCATCACCCAACACTGTGACTGGTAAATGGGACAGTGTATCTACCACACCCAATATCAGTAGTTA 1820 0.406 MTSVYMFGFLIFSFLVQLFSAVNGHRGHCPPSFNCGYLEKIQFPFTKAEQPNCGIFPIQNCDDPRAAKKIQLENQGKQFVVIHVSQSSQYRISIRDENLYRSLQSRSCNRLSHNYTLPISSPLASFQILYNVIMFKCNRNLNVKTPANLGILNYSCGNYDIYYSPLINESRNYFTACSVVQLPVKDLPDAKDPFTFVTAEIPVEVTLSPDCTNCRKKKGQCRLDRNETFYCEGDNRSDLKVKLGLAIGLSSILVIGLLILLAYKRTCVPSDSHFPSRHTSADPYSNIDPESGGVYFGVPLFSYKELQEATNNFDSTRKLGNGGVGTVYYGELLDGREVAIKRLYDHNNRRVEQFMNEIEILTRLRHKNLVALHGCTSRYSHELLLVYEYIPKGTLASHLHDVIHRDVKTNNILLDNNLSVKVADFGLSRLFPNDVTHVSTAPQGTPGYVDPEYHQCYQLTSKSDVYSFGVVLIELISYMLAVDMSRHKDEINLANLAIKKIQRWALNELVDPCLNFESDNEVRRMIVSVAGVAFQCLQQEKELRPTMDEVSEALGRIASGEDEHEYLEEPSPDDEVGLLKNMKQPASPNTVTGKWDSVSTTPNISS 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01690 606 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 398 605 - -
Bva01g01690 606 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 6 400 - -
Bva01g01690 606 Pfam Protein kinase domain 398 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01690 606 SMART serkin_6 313 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01690 606 MobiDBLite consensus disorder prediction 558 576 - -
Bva01g01690 606 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 398 605 IPR044652 -
Bva01g01690 606 ProSitePatterns Serine/Threonine protein kinases active-site signature. 402 414 IPR008271 GO:0004672|GO:0006468
Bva01g01690 606 SUPERFAMILY Protein kinase-like (PK-like) 295 552 IPR011009 -
Bva01g01690 606 MobiDBLite consensus disorder prediction 583 606 - -
Bva01g01690 606 Gene3D Transferase(Phosphotransferase) domain 1 387 574 - -
Bva01g01690 606 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 6 400 IPR044652 -
Bva01g01690 606 MobiDBLite consensus disorder prediction 558 606 - -
Bva01g01690 606 ProSiteProfiles Protein kinase domain profile. 313 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01690 606 Gene3D Phosphorylase Kinase; domain 1 293 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01690 Bva-Chr1 17961277 17965049 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01690 33 606 Receptor kinase-like Gene Family AT1G25390 46.463 2.18e-158 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Bva01g01690 Pkinase 6.4e-23 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01690 01 17961277 17965049 Bva01g01690 01 17961277 17965049 ECH