Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01684 ATGGGTCCAGCTTATTTTTTTCgcttctttctgttttctcaACTTGTGCTACTTCTCTTGGCTGGAGGTGGAATTGGGAAACAAGGGAAGTGCTCAATCTCATTCAACTGTGGAAGTCTTGGGGCTCTTTATTTCCCTTTTACCACCACAGAACACCAGGACTGTGGTTTATTGGCTATAAAAGGTTGTGATGATCCAAGTTCAAGTAAAATGATCCAACTGGAGAAGGATGGAAGATTCTTTGAAGTTATTGAAGTGTCAAAGCAGAACAAtagcattattatttttgacaaaaatctCCATAAGCTTTTGCCATCCAGAAGCTGTGAAGTCTTCCacaataattttactcttccACCCTCCTCTCCAATAGCTTCTTTTTATAGCAGACATATCAGAATTTTCTACAGATGTGATCACACCGTCAAAGTCCCGCGCCTCCCATCTTCCATTTCTAACTTTACCTGTCCTCAGTATATTTATTACTACGACAAATATTCAGAATTTGATGGCACCTTCACCACTTCTTCAAAATGTTCAATGATTCAACTTCCAGGAAAGCAATGGCGGAGTATTGTCCATGAGAAGGGAAGCCCAGGAGCTTTTAACCGTTTAAGTGCTAATATCAGTATTGAAGTTCGATTATCTGATGATTGTTATAGTTGTCACTACCAACGAGGAGGGCAATGCCGGCTTGACAGGAGGGGAAACTTTTACTGTGCCAAAGAGAGGAGTTGGAATTTGAAGCTGGGACTGGGACTAGGTTTAGGTGCTGGAATCTTATGCCTCCTGATAATAATTGGCTGTGTCATTTTGCGGCGCTACAAATGGAATTATACTCCTTCACTTGGTCAATTCCAAGCCAGAAACCCTTATTCAGATCCCTACTCAAATCCAGACACAGAATGTGGCAGTGTCTATTTTGGTGTTCTCCTGTTCTCCTACAAGGAGCTTCAAGAAGCAACAAACAATTTTGACCATGCTAGAGAACTTGGAGAAGGAGGTTTTGGGACAGTTTATTATGGAAAACTCCAAGATGGCAGGGAAGTTGCTGTCAAGCGCCTATATGACCATAATTACAGGCGAGTGAAATTGTTTATGAATGAAGTTGAAATCCTCACGCGCTTACGTCATAGAAATCTTGTGTCCCTATACGGTTGCACTTCATGTCAAAGCCGCGAGTTATTGCTTGTGTATGAATATATCCCAAATGGCACCATTGCTTCTCATCTTCGTAGTAATCTAGGAAAGTCTACATTACTGCCATGGGCTCTGCGAATGAAAATTGCCATTGAGACTGCTAGTGCTTTGGTTTATCTCCATGCTTCTGACATCATTCACCGAGATGTGAAGACTAACAACATTCTTCTTGACAATAGTTATTGTGTTAAAGTTGCAGATTTCGGACTTTCTAGATTGTTCCCCAATGATGTCACCCATGTCTCCACTGCTCCTCAGGGAACCCCAGGTTATGTTGACCCAGAATATCACAGATGCTACCAGCTTACCAATAAGAGTGATGTGTATAGTTTTGGCGTTGTGCTCGTTGAGCTAATATCATCTCTGCCAGCAGTTGACATGACAAGGGATAGGGATGAGATTAACTTGGCTGACTTAGCcatgaaaaagattaaaaagcgTGCATTTAATGAGCTGGTAGATCCTTCCCTTGGATTTGAATTGGACTGTAAGATCAAAAGGATGATATATGCTGTGGTAGAATTGGCTTTTCAGTGTTTGCAATGGGACAGTGAATCGAGACCTTCCATGGACAAAGTTCTAGAGATGCTGAAGAGGATTGTAAGCGAGAGAGACGAGtgtgaaaatgaagaggaaTTAGATGTACACGGTGCTGAGAATTCACACAGTAATATACATTCACGATCACCAACCTCACAAGATAAAGACGAGGATGGCTTATTGAAGAATATGAAGCTATCATCCTCGCCAAACATGGTGACTGATAAGTGGGAATATGAATTAACTGAACGTAATAACAGTATTTG 2006 0.3968 MGPAYFFRFFLFSQLVLLLLAGGGIGKQGKCSISFNCGSLGALYFPFTTTEHQDCGLLAIKGCDDPSSSKMIQLEKDGRFFEVIEVSKQNNSIIIFDKNLHKLLPSRSCEVFHNNFTLPPSSPIASFYSRHIRIFYRCDHTVKVPRLPSSISNFTCPQYIYYYDKYSEFDGTFTTSSKCSMIQLPGKQWRSIVHEKGSPGAFNRLSANISIEVRLSDDCYSCHYQRGGQCRLDRRGNFYCAKERSWNLKLGLGLGLGAGILCLLIIIGCVILRRYKWNYTPSLGQFQARNPYSDPYSNPDTECGSVYFGVLLFSYKELQEATNNFDHARELGEGGFGTVYYGKLQDGREVAVKRLYDHNYRRVKLFMNEVEILTRLRHRNLVSLYGCTSCQSRELLLVYEYIPNGTIASHLRSNLGKSTLLPWALRMKIAIETASALVYLHASDIIHRDVKTNNILLDNSYCVKVADFGLSRLFPNDVTHVSTAPQGTPGYVDPEYHRCYQLTNKSDVYSFGVVLVELISSLPAVDMTRDRDEINLADLAMKKIKKRAFNELVDPSLGFELDCKIKRMIYAVVELAFQCLQWDSESRPSMDKVLEMLKRIVSERDECENEEELDVHGAENSHSNIHSRSPTSQDKDEDGLLKNMKLSSSPNMVTDKWEYELTERNNSI 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01684 668 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Bva01g01684 668 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 10 663 IPR044652 -
Bva01g01684 668 Gene3D Transferase(Phosphotransferase) domain 1 402 614 - -
Bva01g01684 668 ProSiteProfiles Protein kinase domain profile. 325 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01684 668 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 10 663 - -
Bva01g01684 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 445 457 IPR008271 GO:0004672|GO:0006468
Bva01g01684 668 Gene3D Phosphorylase Kinase; domain 1 300 401 - -
Bva01g01684 668 MobiDBLite consensus disorder prediction 608 646 - -
Bva01g01684 668 Pfam Protein tyrosine and serine/threonine kinase 328 597 IPR001245 GO:0004672|GO:0006468
Bva01g01684 668 Coils Coil 590 610 - -
Bva01g01684 668 SUPERFAMILY Protein kinase-like (PK-like) 306 607 IPR011009 -
Bva01g01684 668 SMART serkin_6 325 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01684 Bva-Chr1 17919430 17922707 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01684 35 667 Receptor kinase-like Gene Family AT1G25390 46.512 1.01e-173 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Bva01g01684 PK_Tyr_Ser-Thr 4.9e-48 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01684 01 17919430 17922707 Bva01g01684 01 17919430 17922707 ECH