Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01680 ATGGCAGCTTCAACACCTATTTTGCCAAGGGTTCTCATTGGATCTCGTCGCACTACTCGCAAGAACAAGTTCATAGATTTTGTTGGAGAGTATCATCTTGATCTCATTGTAAAAAATGGAGCTGTCCCTGTCATTGTGCCAAGGGTTAATGGAGTTCACACTCTGCTCGAAGGCTTTGAGCCCATCCATGGAGTTCTTCTTTGCGAAGGCCAGGACATCGATCCCTCCCTTTACGATGCAGAACTGTCTAGATTCTCCCCAGAAGAACTTGAGCAGATCAAGAAGCTTCACCCTAGTGACACTGCCATTGATAAAGAGAAAGACTTAATTGAGCTAAAGCTAGCAAAGCTTTGCCTTGAAAGAAACATACCTTATTTGGGGATATGCAGAGGGTCACAAGTCCTCAATGTTTCATGTGGTGGCACACTTTACCATGATATAGAAGAAGAGCTCTCAAAGAAGTTCCTTGAGTTTCAAAGGGTTGCTCACATAAACTATGAGAATTACGATGAACATAGACATTTGATAAAGATAATGAAGGAAACCCCTTTGCATCATTGGTTTATGGACTGTTTggatgaagagaaaatggagatCATGGTGAATAGTTATCACCATCAAGGTATTAAGAGATTGGCTCGAAGATTCGTCGCAATGGCATTTGCACCAGATGGTTTGGTTGAAGGGTTTTATGATCCTAATGCTTATAATCCTGAAGAGGGAAAGTTTATTATGGGTCTGCAGTTTCATCCAGAGAGAATGAGAATCCCAGATAGTGATGACTTTGATTATCCAGGATGCCCAATGGCTTATCAGGAATTTGTGAAGGctgtaattaattatgagaaaaatctCAGTTTCTCTGCATGCATACCCAAGGCTCTGAAGCTTAGTGAAGACTTGAAGCAAAGGAGAAGAGCAATCCTAGAAAGCTTCTTGGTTGCAAGAAACATTTACAAGTCAGGAATTGAAGTGGTTTCGAACCAAAATTCTGAACTTGAAGCTGGAGCTGAGTTTCTGCAGGAACATACAGCACTGAATTTACAGCAGAATAGGCTGAAGCAGGTGGATGCAACAGTTAGAAATGGACAGAAGCTGAGAATGAATGAGGAACCTGAAAAGCTTGCTATGAATGTAATAGGAAATATGTCCGTAGAACAGTCATCTGAATTAATAGCCTCCAATCGGTTATTGGCTCAGATTTGTTCCGAGTCTTTGgagaaaaaattagataaactACTGCAGTA 1247 0.3945 MAASTPILPRVLIGSRRTTRKNKFIDFVGEYHLDLIVKNGAVPVIVPRVNGVHTLLEGFEPIHGVLLCEGQDIDPSLYDAELSRFSPEELEQIKKLHPSDTAIDKEKDLIELKLAKLCLERNIPYLGICRGSQVLNVSCGGTLYHDIEEELSKKFLEFQRVAHINYENYDEHRHLIKIMKETPLHHWFMDCLDEEKMEIMVNSYHHQGIKRLARRFVAMAFAPDGLVEGFYDPNAYNPEEGKFIMGLQFHPERMRIPDSDDFDYPGCPMAYQEFVKAVINYEKNLSFSACIPKALKLSEDLKQRRRAILESFLVARNIYKSGIEVVSNQNSELEAGAEFLQEHTALNLQQNRLKQVDATVRNGQKLRMNEEPEKLAMNVIGNMSVEQSSELIASNRLLAQICSESLEKKLDKLLQ 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01680 415 PANTHER GLUTAMINE AMIDOTRANSFERASE PB2B2.05-RELATED 6 412 IPR044668 GO:0016811
Bva01g01680 415 Gene3D - 8 287 IPR029062 -
Bva01g01680 415 PANTHER CLASS I GLUTAMINE AMIDOTRANSFERASE-LIKE SUPERFAMILY PROTEIN 6 412 - -
Bva01g01680 415 CDD GATase1_2 11 261 - -
Bva01g01680 415 Pfam Peptidase C26 27 252 IPR011697 GO:0016787
Bva01g01680 415 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 21 284 - -
Bva01g01680 415 SUPERFAMILY Class I glutamine amidotransferase-like 31 257 IPR029062 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01680 Bva-Chr1 17894579 17897285 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01680 01 17894579 17897285 Bva01g01680 01 17894579 17897285 ECH