Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01674 ATGTTACTTCCATTTTTgctgttttttcttctctgcaaCTCTCTTGCACCAGTGAATTCTCTCAATGCTGAAGGCCTTGCGCTTTTGTCTCTCAAGCAGTCTCTTCAAGACCCAGAAGCGTCTCTGAGTAACTGGAATTATTCTGATGACAATCCTTGTTCATGGAATGGGATTACATGCAAGGATCTAAGGGTGGTTTCTGTTAGTGTTCCAAAGAGGAAACTTTATGGGTTTCTTCCTTCTGCTCTAGGAACACTTTCTCAGCTCCGCCATGTAAATTTTAGGAACAATAAGCTCTCTGGAAGGCTTCCTGCGGAGCTCTTTGGAGCGCTGGGGCTGCAAAGCTTGGTGCTTTATGGGAATTCCCTTTCTGGGTCTATTCCAAATGAGATTGGGAAGCTCAGGTACCTTCAAACTTTAGATTTATCACAAAATCTTTTCAATGGGCCATTACCTGCTGCAATTACTCAATGCAAGAGACTCAGAACACTTGTTCTCAGGCAAAACAATTTCACTGGTTCTTTATCTGATAAATTTGGTAGTAATTTGCTTTCACTGGAAAAACTTGACCTTTCTTACAATAATTTCAGTGGGTCAATTCCTAGTGATATGGGAAATCTATCAAGTCTGCAAGGAACTGTTGATTTATCTCATAATCATTTTAATGGTTCAATTCCAGCTAGCCTTGGGAATTTACCTGAGAAGGTTTATATTGATCTAACTTACAACAATTTAAGTGGTCCTATACCCCAAAATGGTGCTTTAATGAACCGAGGACCAACTGCTTTTATTGGCAATCCTGGTCTATGTGGGCCTCCTTTGAAGGATCCATGTTCTTCAGAAGTTTCAGGTGCTAGTTCACCTACCTCATTACCATATTTGCCAGATAACTCCGCACCTCGGGGTACTGATAATGGTTCTGGAAAAGATGGGAGAACCAATGGTTTAAGTAAAAGTGCTGTGATTGCTATCGTAGTGGGTGATGTCATTGGAATTTGCGTTTTGGGATTGTTGTTCTCTTACTGCTACTCAAGGATTTGCGCTAGCAATCAGGAGAAGGACGAAAATGGCTATGGttttgggaaagaaagaaaagggaggaAGGAGTGCTTATGCTTCAGGAAGGATGAATCTGAGACCTTATCTGAAAATGTTGAGCAGCATGATCTTGTCCCATTAGATCCCCAGGTGGCCTTTGATTTGGATGAGCTTCTTAAGGCATCAGCTTTTGTTCTCGGAAAGAGTGGAATAGGAATTGTCTACAAAGTGGTGCTCGAAGATGGGCTGACCTTGGCTGTGAGAAGATTGGGGGAAGGGGGTTCCCAAAGGTTCAAAGAATTTCAGACTGAAGTAGAAGCAATAGGGAAATTAAGGCATCCTAATATAGTTACTCTGAGAGCCTATTACTGGTCTGTTGATGAGAAGCTTCTCATCTATGATTACATAGCCAATGGAAGCCTTGCGACAGCAATTCATGGGAAGCCAGGACTTGTCTCATTCACACCGATATCTTGGTCTGTACGGCTGAGAATCATGAAAGGAATTGCAAAAGGATTAGTCTACCTGCATGAATTCAGTCCTAAGAAATATGTTCATGGGGACGTGAAGCCAAGTAATATACTCCTTGGCCATAACATGGAGCCCCACATTTCTGATTTTGGACTTGGAAGACTTGCAAATATTGCTGGAGGTTCGCCAACCTTGCAATCCAATAGAGTAGCCGCAGAGCAGCCCCCAGAAAGACAAAAGAACTTGTCCACAGAAGGTGCTTCTAATCTCTTGGGAAATGGTTATCAGGCTCCAGAAGCACTTAAAGTCTTGAAGCCATCACAGAAGTGGGATGTTTATTCATATGGGGTGATTTTGCTAGAAATGATCACTGGAAAATTGCCCATAATCCAAGTGGGTAACTCAGAAATGGACCTTGTTCAATGGATTCAGCTCTGCATCGAGGAGAAGAAGCCGCTTTCAGATGTATTAGACCCATATTTGGCTGAAGATGCAGATAGGGAAGAGGAGATCATTGCAGTTTTGAAGATAGCAATTGCTTGTGTCCATAACAGCCCAGAAAAGAGACCCACAATGAGGCATGTATATGATGCTTTGGATAGGTCATCCATATCTTCTGACtg 2132 0.4142 MLLPFLLFFLLCNSLAPVNSLNAEGLALLSLKQSLQDPEASLSNWNYSDDNPCSWNGITCKDLRVVSVSVPKRKLYGFLPSALGTLSQLRHVNFRNNKLSGRLPAELFGALGLQSLVLYGNSLSGSIPNEIGKLRYLQTLDLSQNLFNGPLPAAITQCKRLRTLVLRQNNFTGSLSDKFGSNLLSLEKLDLSYNNFSGSIPSDMGNLSSLQGTVDLSHNHFNGSIPASLGNLPEKVYIDLTYNNLSGPIPQNGALMNRGPTAFIGNPGLCGPPLKDPCSSEVSGASSPTSLPYLPDNSAPRGTDNGSGKDGRTNGLSKSAVIAIVVGDVIGICVLGLLFSYCYSRICASNQEKDENGYGFGKERKGRKECLCFRKDESETLSENVEQHDLVPLDPQVAFDLDELLKASAFVLGKSGIGIVYKVVLEDGLTLAVRRLGEGGSQRFKEFQTEVEAIGKLRHPNIVTLRAYYWSVDEKLLIYDYIANGSLATAIHGKPGLVSFTPISWSVRLRIMKGIAKGLVYLHEFSPKKYVHGDVKPSNILLGHNMEPHISDFGLGRLANIAGGSPTLQSNRVAAEQPPERQKNLSTEGASNLLGNGYQAPEALKVLKPSQKWDVYSYGVILLEMITGKLPIIQVGNSEMDLVQWIQLCIEEKKPLSDVLDPYLAEDADREEEIIAVLKIAIACVHNSPEKRPTMRHVYDALDRSSISSD 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01674 710 CDD STKc_IRAK 412 704 - -
Bva01g01674 710 SMART serkin_6 411 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01674 710 Gene3D Transferase(Phosphotransferase) domain 1 482 709 - -
Bva01g01674 710 Pfam Leucine rich repeat N-terminal domain 22 60 IPR013210 -
Bva01g01674 710 Pfam Protein kinase domain 412 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01674 710 SUPERFAMILY L domain-like 24 275 - -
Bva01g01674 710 Gene3D Phosphorylase Kinase; domain 1 374 481 - -
Bva01g01674 710 Gene3D Ribonuclease Inhibitor 14 74 IPR032675 -
Bva01g01674 710 Gene3D Ribonuclease Inhibitor 75 281 IPR032675 -
Bva01g01674 710 ProSiteProfiles Protein kinase domain profile. 406 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01674 710 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 5 708 - -
Bva01g01674 710 Pfam Leucine rich repeat 160 221 IPR001611 GO:0005515
Bva01g01674 710 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 5 708 - -
Bva01g01674 710 MobiDBLite consensus disorder prediction 569 593 - -
Bva01g01674 710 MobiDBLite consensus disorder prediction 280 312 - -
Bva01g01674 710 ProSitePatterns Serine/Threonine protein kinases active-site signature. 530 542 IPR008271 GO:0004672|GO:0006468
Bva01g01674 710 SUPERFAMILY Protein kinase-like (PK-like) 411 702 IPR011009 -
Bva01g01674 710 MobiDBLite consensus disorder prediction 277 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01674 Bva-Chr1 17873968 17876662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01674 1 710 Receptor kinase-like Gene Family AT2G01210 68.421 0.0 991
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bva01g01674 Pkinase 1.2e-33 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01674 01 17873968 17876662 Bva01g01674 01 17873968 17876662 ECH