Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01673 ATGTTTCTGGGTGTTATGTCACTGTGGAATATTGACATGGAAAAGCCTGAAAACTCTGAATCATTTGTAGCAATTTCAGGGAGCAAAATCCGGAATAACTTTTATAGCTCATGCTTTGCAACTCGGCAAGCTTTGGCCACCAACATTGAAGAGTTAGGTACTTTAAGTTCATCAGTTATCCCAATGGATTCAAACACATCAAGCTTTCTTTTGAACTCTTCAACTTTTCACTCAGTCTTCTACCAAGACAAAGAGGATGATGGCATTATTGATCTGGGACTTGGCCTCAGAACAGTGCAACATGAAGCTTATCATTCTTCCAGCAACCGGGGATATGAAGACCTTATGGATTGGCCACAGGCCAATCTCAACCTGAAGAATTCAAGCACAATGCACTCTAAATCTCTCCAAGAAAACTTTGATGAAGAGATAGAGGGAGTGCAAAGCAATGAGAGGTGGGCTTATGTGAAGGTTAACATGGATGGAGTCACCATTGGCAGGAAAATTTGTATACTTGACCATGGAAGCTACTCAAGTCTAGCAATGAAACTAGAAGATATGTTTGGCAGCCAAACTTTTTCTGGGTTAAAACTATTCAAATCAGGGTCAGAGTACTCATTATTCTACAAAGACAGAGAAGAAAACTGGAGGACTGTTGGTGATGTCCCATGGAAAGAGTTCATAGAATGTGTGAAGAGGTTAAGGATTGCAAGAAAAACAGCAGCCTATGTTCCTTGTTCATCTGGATACAGTTA 755 0.404 MFLGVMSLWNIDMEKPENSESFVAISGSKIRNNFYSSCFATRQALATNIEELGTLSSSVIPMDSNTSSFLLNSSTFHSVFYQDKEDDGIIDLGLGLRTVQHEAYHSSSNRGYEDLMDWPQANLNLKNSSTMHSKSLQENFDEEIEGVQSNERWAYVKVNMDGVTIGRKICILDHGSYSSLAMKLEDMFGSQTFSGLKLFKSGSEYSLFYKDREENWRTVGDVPWKEFIECVKRLRIARKTAAYVPCSSGYS 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01673 251 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 62 243 IPR003311 GO:0005634|GO:0006355
Bva01g01673 251 PANTHER AUXIN-RESPONSIVE PROTEIN IAA34 62 243 - -
Bva01g01673 251 ProSiteProfiles PB1 domain profile. 153 241 IPR000270 GO:0005515
Bva01g01673 251 Pfam AUX/IAA family 113 241 IPR033389 -
Bva01g01673 251 SUPERFAMILY CAD & PB1 domains 153 236 - -
Bva01g01673 251 Gene3D - 147 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01673 Bva-Chr1 17869156 17871458 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01673 154 240 B3 DNA Binding Superfamily AT1G19850 36.782 2.26e-09 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Bva01g01673 AUX_IAA 2.8e-25 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01673 01 17869156 17871458 Bva01g01673 01 17869156 17871458 ECH