Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01671 ATGTCCAGTGAAAGTGGAGTTGAAGTGAAGAAAGTGTTTATTGGAGCAGGATGTAACAGGATAGTGAACAATGTATCCTGGGGTGCTTCTGGCTTGGTTTCGTTTGGTGCTCAAAACGCCGTTGCTATATTCTGCCCCAAGAGTGCTCAAATTTTGACTACTCTTCCGGGTCACAAGGCAGTTGTGAATTGCACCCACTGGCTCCCAAGCAGCAAGTTTGCGTTTAAAGCAAAAGAGTTAGAACGACATTATTTGCTATCTGGGGATGCAGATGGTGCCATCATTCTATGGGAATTGTCCCTTGTTGATGGAAAGTGGAGGCATGTGTTACAAGTACCACAATCACACAAGAAAGGTGTTACATGCATTACTGGAATTATGATTTCTCAAACTGAGGCAATGTTTGCATCTACCTCTTCAGATGGTATAGCTTCTTTATGGGAACTGGTATTTCCATCAACTAATGGAGGTGACAGTAAAATATCATGTCTGGATTCTTTCTCTGTTGGTTCTAAAAGTATGGTTGCCCTATCATTGGCGGAGTTGCCTGGAAATAATGGGCAAATAGTCCTTGCAATGGGAGGATTGGACAACAAGGTTCATCTTTATTGTGGGGAAAGGACAGGAAAGCTTGTCCATGCATGTGAACTAAAAGCACATACTGATTGGATTCGGAGTCTGGACTTCTCATTACCTATAAGCATCAATGGGAAATCAGACAGTATTTTTCTGGTAAGTTCATCTCAGGATAAAGGCATACGAATTTGGAAGACAGAATTGCTTGGCCCTACTTCCAGTGGACATGGTATATACAGGAAAGAAGAGATGAGCTTGTCATCCTATATGAAAGGTCCCATGTTTGTAGCTGGGTCATCCACTTTTCAGATATCTTTGGAATCTCTTCTGATTGGACACGAGGATTGGGTATACTCAGTGGAGTGGCAACCCCCTTTAGTAGCGTACACAGAAGGCTTTGGCTATTACCAGCCTCTAAGCATCTTATCTGCATCTATGGACAAGACTATGATGATCTGGCAACCTGAAAAGACTTCTGGTATCTGGATGAATGTGGTCACTGTTGGGGAATTAAGCCATTGTGCTCTGGGGTTCTATGGTGGTCACTGGAGCCCAAACGGGGACTCAATTTTAGCTCATGGATATGGGGGATCTTTCCATCTCTGGAAAAATGTTGGTGATGATAATTGGATGCCACAAAAAGTTCCCTCTGGTCACTTTGCGTCAGTGACTGATATTGCATGGGGTAGATCTGGTGACTATGTTCTGTCTGTCAGTCATGACCAGACTACTAGAATTTATGCTCCATGGAATACTGAGGATTCTTGTCAAGATGAGGAGATTTGGCATGAAATAGCTCGCCCTCAGATTCATGGTCATGATATTAATTGTGTGACAGTTATCCAAGGTAAGGGGAACCATCGTTTTGTCAGTGGAGCTGAAGAGAAAGTGGCCAGAGTTTTTGAAGCCCCTTTATCCTTTTTGAAGACATTGAATAATACCTCTTTGCAGAAATCTTGTTCCTCTGAGGATATCCAATTAGATGTTAAGATTTTGGGTGCAAATATGTCTGCTCTTGGATTATCACAGAAACCTATTTATGTTCAAGCGGTGCATGAGATTCCTGAGAGAAACGGGATTGATGATCTTGACACCCTTGAAAAAATTCCTGATGCGGTTCCAACTGTGTTCACTGAACCTCCAATTGAAGATCAACTTGCTTGGCATACATTATGGCCTGAATCACACAAACTTTATGGTCATGGAAATGAACTCTTCTCTTTATGCTGTGACCACAAGGGTGAGCTTGTTGCTTCTTCATGTAAGGCTCAGTCTGCAACTGTGGCAGAAATATGGCTTTGGGAGATTGGTTCATGGAAGGCAGTTGGCCAGCTGCAATCTCACAGTTTGACTGTGACAAAGATGGAATTCTCACATGATGACAGATTCCTTTTAACTGTTTCAAGGGATCGCCAATTCTCAGTTTTTACTATCACAAGAACAGGCACTGGTGATGTTAGTTACAATCTTCTTGCCAGGCAGGAAGGACACAAAAGAATCATCTGGTCTTGTTCTTGGAACCCACATGGCTATGAATTTGCAACGGGTTCGCGTGACAAGACAGTGAAAATTTGGGCTGTAGAGAGGGCTTCTTCTGTCAGACTGCTTACAACTCTACCACCACTTGCTAGTAGTGTTACAGCATTATCTTGGGTTGGTCTCCATGATCGGAGAAACGATGGACTTTTAGCCATTGGAATGGAAAATGGACTCATAGAACTGTGGAGTCTGTCCTACAAAAGAGCAGACGATGGAAGCATTGCAGCACCAGGTCTGGCTGCTTCTCTTTTCGTACGTGTTGATCCTTTTCTATGTCACGTCTCTGCTGTAAACCGTTTGGCATGGAGGAAGAAATCAGAAGATGGCACGAATATGCAACTTGCTTCTTGTGGAGTTGATAATTGTGTAAGAGTGTTTGACGTAACAGTTAGCTA 2510 0.4295 MSSESGVEVKKVFIGAGCNRIVNNVSWGASGLVSFGAQNAVAIFCPKSAQILTTLPGHKAVVNCTHWLPSSKFAFKAKELERHYLLSGDADGAIILWELSLVDGKWRHVLQVPQSHKKGVTCITGIMISQTEAMFASTSSDGIASLWELVFPSTNGGDSKISCLDSFSVGSKSMVALSLAELPGNNGQIVLAMGGLDNKVHLYCGERTGKLVHACELKAHTDWIRSLDFSLPISINGKSDSIFLVSSSQDKGIRIWKTELLGPTSSGHGIYRKEEMSLSSYMKGPMFVAGSSTFQISLESLLIGHEDWVYSVEWQPPLVAYTEGFGYYQPLSILSASMDKTMMIWQPEKTSGIWMNVVTVGELSHCALGFYGGHWSPNGDSILAHGYGGSFHLWKNVGDDNWMPQKVPSGHFASVTDIAWGRSGDYVLSVSHDQTTRIYAPWNTEDSCQDEEIWHEIARPQIHGHDINCVTVIQGKGNHRFVSGAEEKVARVFEAPLSFLKTLNNTSLQKSCSSEDIQLDVKILGANMSALGLSQKPIYVQAVHEIPERNGIDDLDTLEKIPDAVPTVFTEPPIEDQLAWHTLWPESHKLYGHGNELFSLCCDHKGELVASSCKAQSATVAEIWLWEIGSWKAVGQLQSHSLTVTKMEFSHDDRFLLTVSRDRQFSVFTITRTGTGDVSYNLLARQEGHKRIIWSCSWNPHGYEFATGSRDKTVKIWAVERASSVRLLTTLPPLASSVTALSWVGLHDRRNDGLLAIGMENGLIELWSLSYKRADDGSIAAPGLAASLFVRVDPFLCHVSAVNRLAWRKKSEDGTNMQLASCGVDNCVRVFDVTVS 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01671 836 Gene3D - 677 836 IPR015943 GO:0005515
Bva01g01671 836 Gene3D - 1 170 IPR015943 GO:0005515
Bva01g01671 836 Gene3D - 177 269 IPR015943 GO:0005515
Bva01g01671 836 SMART WD40_4 724 768 IPR001680 GO:0005515
Bva01g01671 836 SMART WD40_4 208 257 IPR001680 GO:0005515
Bva01g01671 836 SMART WD40_4 295 346 IPR001680 GO:0005515
Bva01g01671 836 SMART WD40_4 630 669 IPR001680 GO:0005515
Bva01g01671 836 SMART WD40_4 679 718 IPR001680 GO:0005515
Bva01g01671 836 SMART WD40_4 103 148 IPR001680 GO:0005515
Bva01g01671 836 SMART WD40_4 48 98 IPR001680 GO:0005515
Bva01g01671 836 SMART WD40_4 788 832 IPR001680 GO:0005515
Bva01g01671 836 SMART WD40_4 356 395 IPR001680 GO:0005515
Bva01g01671 836 SMART WD40_4 453 494 IPR001680 GO:0005515
Bva01g01671 836 SMART WD40_4 401 440 IPR001680 GO:0005515
Bva01g01671 836 SMART WD40_4 583 627 IPR001680 GO:0005515
Bva01g01671 836 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 686 720 - -
Bva01g01671 836 PANTHER ELONGATOR COMPLEX PROTEIN 2 1 835 - -
Bva01g01671 836 ProSiteProfiles Trp-Asp (WD) repeats profile. 408 439 IPR001680 GO:0005515
Bva01g01671 836 PANTHER WD REPEAT-CONTAINING 1 835 - -
Bva01g01671 836 SUPERFAMILY WD40 repeat-like 186 721 IPR036322 GO:0005515
Bva01g01671 836 Pfam WD domain, G-beta repeat 404 439 IPR001680 GO:0005515
Bva01g01671 836 Pfam WD domain, G-beta repeat 687 717 IPR001680 GO:0005515
Bva01g01671 836 Pfam WD domain, G-beta repeat 216 257 IPR001680 GO:0005515
Bva01g01671 836 Pfam WD domain, G-beta repeat 50 97 IPR001680 GO:0005515
Bva01g01671 836 Gene3D - 576 676 IPR015943 GO:0005515
Bva01g01671 836 Gene3D - 286 407 IPR015943 GO:0005515
Bva01g01671 836 Gene3D - 408 521 IPR015943 GO:0005515
Bva01g01671 836 ProSiteProfiles Trp-Asp (WD) repeats profile. 686 727 IPR001680 GO:0005515
Bva01g01671 836 SUPERFAMILY WD40 repeat-like 687 833 IPR036322 GO:0005515
Bva01g01671 836 PRINTS G protein beta WD-40 repeat signature 705 719 IPR020472 -
Bva01g01671 836 PRINTS G protein beta WD-40 repeat signature 333 347 IPR020472 -
Bva01g01671 836 PRINTS G protein beta WD-40 repeat signature 244 258 IPR020472 -
Bva01g01671 836 SUPERFAMILY WD40 repeat-like 30 350 IPR036322 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01671 590 720 Miscellaneous Gene Families AT5G08390 27.481 3.11e-06 48.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01671 01 17856976 17862615 Bva01g01671 01 17856976 17862615 ECH