Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bva01g01670 | ATGGAGGCGCCACCACCTCCAGCAACCGCTGCTCCGCCACTGTCCTCCACCGTTCCCTCTCCGCCTCCTCACCTCAGCTATCCCGACTCGGTGGATTCCTCTCCCCGGTCCCGCAACGCCGACTGGGATGACTCATTCCCTGCCACTGCTGCCTCCTCCAAGCTCCGCCTCATGTGCAGCTATGGCGGCCACATCGTTCCCCGCCCCCACGATAAGTCTCTCTGCTATATCGGCGGCGATACCCGTATCATCGTTGTTGACCGTCATACCTCCCTGGCTGATTTCTCTTCCCGACTCTCCAAAACATTTCTTAATGGCCGTTCCTTCACTCTGAAATACCAGCTACCGAGTGAAGATCTTGATTCCCTTATCTCCGTCACCACCGATGAGGACCTTGATAACATGATCGACGAATATGATCGCACAACAGCCAATTCCACAAACCCATCTGTTAAACCTTCTAGGCTTCGCCTATTTCTCTTTACGACTAAACCCGATTCCTCGCAATCAATCGGACCCATACTTGATAGCTCGGTCAAGTCAGACGACTGGTTCCTGAACGCCCTTAACAGTGCCGGCATGCTCGATAGAGGGTTCTCTGAATCTGCTTCGGTGAATTGTTTGCTGGGTCTCGATGATGAGGTTGGTGGCAACAATCTTGACCCGGGTTCCAGAGATGCTGAGGCTGCTCAAGCTGGATCTTTTGGAAATGGCAAGAATTTGAAGCAGGGGCAGGATGTTCAGTCTGTGCCCGATTCCCCCATGCTGGAAACCACGTCTTCTTTTGGGTCTACTTCGTCGTCACCGTCGGTGGCTAATTTGCCGCCGATTCGTGTGCGCGTAGATGATGGAAGTGGTGGTAAGGATCAGAAAGTGGGCATTGAGGAACAATTTGCCCAGCTGGGTGTTGGCTCTGGGCACAAGCAGGAGGAGGGTTTTGCTGTGCTGTCTTCACCACCTCCGATGCCAGCTTCCATTTTAGCATCATCGGGTGTGCCCATCGGCTCCGCGGCGGTTGAACACCAGAATCGGGTTTTCTCGGATGACGAGAGATCAGACCACGGCGTGCAGGTGGGCAATCGAAAACCACCAACACCACAACCACAGTCTCAGCCACAGCCTCAGACTCTGCCTCCCCAATTTCACCAGAAGTCATCCGGCGTTGTTGATTTGCCTTCCCCAGATTCAGTTTCCAGTGATAGTAGTCTTACAAATGCAATGTCACGTCCCAAACCTGTAATTTATCAAGAACAAGTTCAAGTTCAAATTCCTTCTGGAACAAGGTTACCCAGTAACCCTGTTGATCCAAAACATAATCTTTCTGATCCAAACGCTAGAATCCAGATGCAGCAACAGTTACAGGAACCTGGATATGTCTTGCAACAGCAATTTGAACAACAGCAGCAACAACctcaacagcagcagcaatttgaacaacagcagcaacaacctcaacagcagcagcaattTATACATGGCACGCATTTCATTCACCATACTCCCGCAGGGGCTGTGCAAATCCCTGCATATTACCCTGTATATCCTTCTCAGCAACAGCCTCAATCTCACCATCAGCTTGATCAGCAATACCAAGTATACTATGTGCCTGCAAGACAACCTCAAGCTTACAACCTGCCTGTTCAGCCGCAGAATATCAGTGAAACCACCACCACCATACCTTCCAGCCGCCCTCAAGCACAGCCAAATCCTGCAATGGTTGCACCATCTGCAGCTTATAACCCCATGAGAAATGCACCCATTCCTAAGTCTGAAATGACAGCAGCTGCATATAGAACTGCAACTGCAGGTAACCCTCAGTTAGTTCAAGTTCCTCCAAGTCAGCATCAGCATCAGCATCAGCATCAGCAACAGCATCAGCATCAGCATCAGCAACAGTATGTTGCTTACTCCCAGATTCATCACCCATCTCATTCTGTTGCTGCAAATTCTGCTCCCCCAGCTAGTTATGCTTATGACTATGTCGACCCTGCTCATGCTCAAATATACTATACTCAACCTCTGGCACCGACAATGCCTTCACAATACCAAACCATGACAGCTGCTGCCACAGGGCTACCAGAAGTCTCTGCTCAGCTTACTTCAGATAGCATGAAGCAGCAGATAAGAACCTCACAGCCATTATA | 2144 | 0.4907 | MEAPPPPATAAPPLSSTVPSPPPHLSYPDSVDSSPRSRNADWDDSFPATAASSKLRLMCSYGGHIVPRPHDKSLCYIGGDTRIIVVDRHTSLADFSSRLSKTFLNGRSFTLKYQLPSEDLDSLISVTTDEDLDNMIDEYDRTTANSTNPSVKPSRLRLFLFTTKPDSSQSIGPILDSSVKSDDWFLNALNSAGMLDRGFSESASVNCLLGLDDEVGGNNLDPGSRDAEAAQAGSFGNGKNLKQGQDVQSVPDSPMLETTSSFGSTSSSPSVANLPPIRVRVDDGSGGKDQKVGIEEQFAQLGVGSGHKQEEGFAVLSSPPPMPASILASSGVPIGSAAVEHQNRVFSDDERSDHGVQVGNRKPPTPQPQSQPQPQTLPPQFHQKSSGVVDLPSPDSVSSDSSLTNAMSRPKPVIYQEQVQVQIPSGTRLPSNPVDPKHNLSDPNARIQMQQQLQEPGYVLQQQFEQQQQQPQQQQQFEQQQQQPQQQQQFIHGTHFIHHTPAGAVQIPAYYPVYPSQQQPQSHHQLDQQYQVYYVPARQPQAYNLPVQPQNISETTTTIPSSRPQAQPNPAMVAPSAAYNPMRNAPIPKSEMTAAAYRTATAGNPQLVQVPPSQHQHQHQHQQQHQHQHQQQYVAYSQIHHPSHSVAANSAPPASYAYDYVDPAHAQIYYTQPLAPTMPSQYQTMTAAATGLPEVSAQLTSDSMKQQIRTSQPL | 714 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bva01g01670 | 714 | MobiDBLite | consensus disorder prediction | 345 | 410 | - | - | |
| Bva01g01670 | 714 | SUPERFAMILY | CAD & PB1 domains | 70 | 171 | - | - | |
| Bva01g01670 | 714 | MobiDBLite | consensus disorder prediction | 609 | 631 | - | - | |
| Bva01g01670 | 714 | MobiDBLite | consensus disorder prediction | 470 | 489 | - | - | |
| Bva01g01670 | 714 | MobiDBLite | consensus disorder prediction | 236 | 273 | - | - | |
| Bva01g01670 | 714 | Gene3D | - | 74 | 163 | - | - | |
| Bva01g01670 | 714 | MobiDBLite | consensus disorder prediction | 219 | 290 | - | - | |
| Bva01g01670 | 714 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
| Bva01g01670 | 714 | SMART | PB1_new | 69 | 163 | IPR000270 | GO:0005515 | |
| Bva01g01670 | 714 | MobiDBLite | consensus disorder prediction | 1 | 45 | - | - | |
| Bva01g01670 | 714 | CDD | PB1_UP2 | 58 | 161 | - | - | |
| Bva01g01670 | 714 | PANTHER | EXPRESSED PROTEIN | 11 | 705 | - | - | |
| Bva01g01670 | 714 | MobiDBLite | consensus disorder prediction | 376 | 410 | - | - | |
| Bva01g01670 | 714 | PANTHER | OS05G0427100 PROTEIN-RELATED | 11 | 705 | - | - | |
| Bva01g01670 | 714 | Pfam | PB1 domain | 70 | 162 | IPR000270 | GO:0005515 | |
| Bva01g01670 | 714 | ProSiteProfiles | PB1 domain profile. | 54 | 154 | IPR000270 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bva01g01670 | Bva-Chr1 | 17851978 | 17854533 | Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bva01g01670 | 30 | 239 | MAP Kinase Kinase Kinase | AT3G46920 | 31.019 | 3.95e-24 | 106 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Bva01g01670 | 01 | 17851978 | 17854533 | Bva01g01670 | 01 | 17851978 | 17854533 | ECH | |
| Bva01g01670 | 01 | 17851978 | 17854533 | Bva04g00844 | 04 | 5543871 | 5547080 | ECH | |
| Bva01g01670 | 01 | 17851978 | 17854533 | Bva03g00699 | 03 | 4174497 | 4176893 | ECH | |
| Bva01g01670 | 01 | 17851978 | 17854533 | Bva03g01787 | 03 | 16033400 | 16035699 | ECH | |
| Bva01g01670 | 01 | 17851978 | 17854533 | Bva04g00585 | 04 | 3841814 | 3845075 | ECH |