Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01660 atggagaaagtCTGTGAATTCTGCACAGCTTTGAGGCCAATTGTTTACTGTAGGTCTGATGGCGCATATCTTTGCTTATCCTGTGATGCAAAGGTCCATTTTGCCAATGCATTGTCCAGGCGGCATCTCCGGGCTCTTGTATGTGATGTGTGTAGATACCATCTTGCTTATGTACAGTGCTTGAATCACCAAATGTTAATCTGCCGTGGCTGCGATCAAAAGCTGCATAATAACTCCACCCAACATCAGAGACGACCTATCAGAAGTTACATGGGATGCCCTTCTGCCAAGGACTTTGCAGCCCTGTGGGGTTTTCAATTGAATGAGATTGAAAATAATCCTCATCAAGATCAGCTTGCATCCAATTTGGGTGGTTCTGCAGATTTTAATGCAGTAAATATCTCAGAACAGCCTAGCATTGCAACTGGAGGCCCTTCAATGGAGTCCAAGGTCAAATTGGAAGGGGGATCAAGCAGTCAACATGGTCAGATACAGCAAAAAGATCAGGACAGGAAAACTATTCTGCAGCAGATTGTCGAATTAAAAAGGCTTCAGCTTGGTGAGGAAAGAAGTCATCCTTCAAAGATAATTGGGATAAGAGAAACAGATTTACCATCTTCATTGTATCGTAACATGAAGAAACTCGATGAAAGATTCGATCAAGCAGCACAAAATTCTAAGGATCTTGCTACTGATATTCCTGAAAAAGACAATCCCATGGCAGAGCTGAAACCAGAAACAGTGTCTTCTACATTTTCTGAACTTGATGATTTATCTTCGTCTTCAATCATAGACCTTCCATCACAAGGAGAATTCTTTTGGACATGTAGAAGTCCAATTGAAAGTAATCAGTTATGGTCTCAAAATATTGAAGACCTTGGGATCTGCGAAGAACTTATTTCTCAAGATGATTTTAACATGCCTGATATTGACTTAACATTCCAAAACTTTGAAGAACTATTTGGAGGAGATCAAGATCAAGCTAGGGGGCTGCTTTATGGGAAAGATTTCTCCTGCTCCTCTTTTGAGAAGGATATGTCACTTGATAAGTCAGATACTGACAACGCAAGTGCAATGGAGGATACTTCGGCAGCTGCATCTATCACTATCACCCAATCTGGTAAAGAGTACAAGGATATAAGTTCTCTTCACCGAGATCATCCAAGAAGCAAGGATCCTTCTGGCACAATTCGACCATCAAAATCTACTATATCATTATCGGTTTCAAGATTTAGTGCTGAAAGCAGTGGTACTTATCACCAAGATAGTGGACTTTCTCTCTGCAATGAAGGGAAGGTTGGAAACCCGGAGGCCGGAGGAAATGCCTCTGTGAAATATAAAGACAAGAAGGCAAGAGCGCAAGAGAAGCATGCTCGATATCCTTCATGGAAATCTGTTGCTAATGTGACAAAGAGGGTGAAAGGCCAAGTTGCCAAGGCAGAAAGCTTTTA 1451 0.4128 MEKVCEFCTALRPIVYCRSDGAYLCLSCDAKVHFANALSRRHLRALVCDVCRYHLAYVQCLNHQMLICRGCDQKLHNNSTQHQRRPIRSYMGCPSAKDFAALWGFQLNEIENNPHQDQLASNLGGSADFNAVNISEQPSIATGGPSMESKVKLEGGSSSQHGQIQQKDQDRKTILQQIVELKRLQLGEERSHPSKIIGIRETDLPSSLYRNMKKLDERFDQAAQNSKDLATDIPEKDNPMAELKPETVSSTFSELDDLSSSSIIDLPSQGEFFWTCRSPIESNQLWSQNIEDLGICEELISQDDFNMPDIDLTFQNFEELFGGDQDQARGLLYGKDFSCSSFEKDMSLDKSDTDNASAMEDTSAAASITITQSGKEYKDISSLHRDHPRSKDPSGTIRPSKSTISLSVSRFSAESSGTYHQDSGLSLCNEGKVGNPEAGGNASVKYKDKKARAQEKHARYPSWKSVANVTKRVKGQVAKAESF 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01660 483 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 432 - -
Bva01g01660 483 MobiDBLite consensus disorder prediction 377 401 - -
Bva01g01660 483 MobiDBLite consensus disorder prediction 378 394 - -
Bva01g01660 483 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Bva01g01660 483 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 432 - -
Bva01g01660 483 MobiDBLite consensus disorder prediction 137 170 - -
Bva01g01660 483 CDD Bbox1_BBX-like 4 44 - -
Bva01g01660 483 MobiDBLite consensus disorder prediction 351 370 - -
Bva01g01660 483 SMART bboxneu5 48 87 IPR000315 GO:0008270
Bva01g01660 483 SMART bboxneu5 1 47 IPR000315 GO:0008270
Bva01g01660 483 ProSiteProfiles Zinc finger B-box type profile. 43 87 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01660 Bva-Chr1 17788803 17793123 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01660 1 324 C2C2-CO-like Transcription Factor Family AT1G68190 40.673 2.52e-67 218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01660 01 17788803 17793123 Bva01g01660 01 17788803 17793123 ECH