LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva01g01656	ATGTCCCAAAATGGTTCTGTGGAGCACAGAACGCAGCCCCAGGTACCCCCTTCCGCCAAGGAAGACACTGCTCCAATGCCCAGCTTGCCCACCCTAATGCATAGCCTCCGTGTGAGCCCCAAAATTGACCACAAGCCAGACAGCTATGAAGACCTGCCATTGGAGTTTAGCCACCTTCTCTTCAGCTCCCTGGAGCAGCATTTACCTCTTCATATGCTCAACACTTCACGTGAAGCTAAGATTCAGTACCTGAGAAACATCGTGCACCGGTACTTACCAGATAGTGAACGCATTCggGTACAAAGGCACAAGGAATATAGGCAGAGGATCCTGATGAATTATCCACCACTACATAAGGAGATATATGCCATGCATGCTGAAAACTTTTTTGTATCCTCATTTCTTCAAGCAATTAGAGATAATAAAGAAGATAGTTTTAGAAGTATAGTGGCTGAACCTACTAAAGGGATTTATACATTTGAAATGCTTCAGCCACATTTCTGTGAAATGTTGGCATCTGAGGTTGAACATTTTGAAAGATGGGTCCATGAGACAAAATTCAGAATCATGCGACCAAACACCATGAACCAATATGGTGCTGTTCTTGATGATTTTGGCCTGGAAACCATGCTTGGCAAATTGATGAATGATTTTATACGTCCTATGGCTCGAGTTTTCTTTGCTGATATTGGCGGATCCACATTGGACTCTCATCATGGCTTTGTTGTTGAATATGGAATTAATAGGGATGTCGAACTTGGATTCCATGTGGATGACTCAGAAGTCACATTGAATGTTTGCTTGGGAAAACATTTTTCTGGTGGAGAACTATTCTTCCGTGGTGTTCGATGTGATGAACATGTGAATACAGAAACCCTACAAGAGGAGATCTTCGATTATTGCCATGTTCCAGGACGTGCAGTTCTGCACTGTGGTCGTCATCGACATGGTGCTAGAGCTACAACTTCTGGGAATCGGATCAACTTGATTCTGTGGTGTAGAAGTTCCGCTTTTAGGGAGCTGAAGAAATATCAGACAACTTTTCCCAGCTGGTGTGGAGAATGCAAGCGCAAGAAGAAGGAGAGAGAGCGTACATCAATTGCTGCCACCAAACAGGAACTACTCAAGAGGGAAGTTAGATCTAGCTCATG	1151	0.4379	MSQNGSVEHRTQPQVPPSAKEDTAPMPSLPTLMHSLRVSPKIDHKPDSYEDLPLEFSHLLFSSLEQHLPLHMLNTSREAKIQYLRNIVHRYLPDSERIRVQRHKEYRQRILMNYPPLHKEIYAMHAENFFVSSFLQAIRDNKEDSFRSIVAEPTKGIYTFEMLQPHFCEMLASEVEHFERWVHETKFRIMRPNTMNQYGAVLDDFGLETMLGKLMNDFIRPMARVFFADIGGSTLDSHHGFVVEYGINRDVELGFHVDDSEVTLNVCLGKHFSGGELFFRGVRCDEHVNTETLQEEIFDYCHVPGRAVLHCGRHRHGARATTSGNRINLILWCRSSAFRELKKYQTTFPSWCGECKRKKKERERTSIAATKQELLKREVRSSS	383

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva01g01656	383	ProSiteProfiles	Fe(2+) 2-oxoglutarate dioxygenase domain profile.	236	335	IPR005123	-
	Bva01g01656	383	MobiDBLite	consensus disorder prediction	1	31	-	-
	Bva01g01656	383	PANTHER	2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED	26	380	-	-
	Bva01g01656	383	SMART	p4hc	155	334	IPR006620	GO:0005506\|GO:0016705\|GO:0031418
	Bva01g01656	383	Gene3D	q2cbj1_9rhob like domain	153	335	-	-
	Bva01g01656	383	PANTHER	2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2	26	380	-	-
	Bva01g01656	383	MobiDBLite	consensus disorder prediction	1	18	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva01g01656	Bva-Chr1	17741700	17746151	Transposed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bva01g01656	01	17741700	17746151	Bva01g01656	01	17741700	17746151	ECH