Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01650 ATGAATGAACCAGAGAACAAGAACCTTGGAGAGAGCCTATTACAAAACCAAAGAGAGGAAAGAATAGAGACTGAGCAGAGCATAACATGGACGGCTTTCAGCCAAGAAGTAAAGAGGATTGGCTTCCTAGCAGGACCCATGGTGCTTGTGATTTCTTCCCAATATCTGATACAGGTTGTGTCAACCATGATGGTTGGTCACCTGAGTGAGCTTTCTCTTTCCGGCGCTGCCTTAGCCATCTCCCTCGCCGGAGTCACTGGTTTCAGTTTACTCTTGGGAATGGCTTGTGGACTGGAAACCATTTGTGGGCAGGCTTATGGAGCAAAgcaatatgaaaaatttgggATGCAAACATACACTGCCATGTTCTCTCTCATACTGGTTTGCATTCCCCTTTGTTTCATTTGGACCAACATTGAAAATATACTACTTTTCATAGGCCAGGATCCCCTCATATCACATGAAGCAGGGAAGTTCTTTCTTTGGCTTGTTCCTGGACTTTTTGCATATGCGATCCTGCAGCCATTGGTTAGATACTTCCAAATGCAAAGTTTGGTTGCTCCCATGCTCATAAGTTCTTGTGCTACTCTTTGTCTCCATATACCTCTTTGCTGGGCATTGGTATTCAAGTCTGGACTCTATAATGCTGGTGGGGCAATAGCAATTAGTATTTCGAATTGGTTGAATGTAATCTTTCTTGGATTATATATGAGATACTCTTCTTCCTGCGCGAAAACCCGTGTTCCAGTTTCTATGGAGATGTTCAAAGGAATCGGGGAATTCTTTCGCTTTGCTGTCCCTTCTGCAGTAATGATCTGCCTTGAATGGTGGTCATTTGAGATGCTAGTCTTGATGTCTGGGCTATTACCAAATCCAAAACTTGAAACTTCTGTTCTATCTGTATGTCTCAATACTATTGCTACACTCTACACTATTCCTTTTGGAGTAGGTGCTGCTGGAAGCACAAGGGTTTCAAATGAATTAGGAGCTGGGAATCCTAAAGCTGCTCGAGTTGCTGTCTTGGCTGCGATGTCTATAGCAATCATGGAGACAAGCATAGTGAGCGCAACCCTCTTTGCCTGCCGCCATGTTTATGGTTATACATTTAGCAATGAGAAGGAAGTTGTTGACTATGTCACTGTCCTAGCTCCTCTGGTTTCTATATCTGTCATACTAGACAGCGTACAAGGTGTTCTTTCAGGCATTGCTAGAGGCTGTGGGTGGCAGCATCTAGGGGCTTACATCAATCTGGGGGCCTTCTACCTTTGTGGAATTCCAGTTGCTGCCACATTGGGATTTTGGGCAAAGATGAGAGGAAAGGGCCTATGGATTGGTATACAAGTTGGGGCTTTGGTGCAAGTTGTTCTCCTTTCTATCATAACAAGTCGCACAAATTGGAAAGAGCAGGCAAACAAGGCAAGAAAGAGGCTATCTGAAGGACAACTTTCAGCAGAGAATGGATTGGTATG 1469 0.437 MNEPENKNLGESLLQNQREERIETEQSITWTAFSQEVKRIGFLAGPMVLVISSQYLIQVVSTMMVGHLSELSLSGAALAISLAGVTGFSLLLGMACGLETICGQAYGAKQYEKFGMQTYTAMFSLILVCIPLCFIWTNIENILLFIGQDPLISHEAGKFFLWLVPGLFAYAILQPLVRYFQMQSLVAPMLISSCATLCLHIPLCWALVFKSGLYNAGGAIAISISNWLNVIFLGLYMRYSSSCAKTRVPVSMEMFKGIGEFFRFAVPSAVMICLEWWSFEMLVLMSGLLPNPKLETSVLSVCLNTIATLYTIPFGVGAAGSTRVSNELGAGNPKAARVAVLAAMSIAIMETSIVSATLFACRHVYGYTFSNEKEVVDYVTVLAPLVSISVILDSVQGVLSGIARGCGWQHLGAYINLGAFYLCGIPVAATLGFWAKMRGKGLWIGIQVGALVQVVLLSIITSRTNWKEQANKARKRLSEGQLSAENGLV 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01650 489 CDD MATE_eukaryotic 36 472 IPR045069 GO:0042910|GO:1990961
Bva01g01650 489 Pfam MatE 267 429 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva01g01650 489 Pfam MatE 46 205 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva01g01650 489 PANTHER PROTEIN DETOXIFICATION 16 476 - -
Bva01g01650 489 PANTHER MULTIDRUG RESISTANCE PROTEIN 16 476 - -
Bva01g01650 489 TIGRFAM matE: MATE efflux family protein 46 443 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01650 Bva-Chr1 17678344 17682770 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01650 01 17678344 17682770 Bva01g01650 01 17678344 17682770 ECH
Bva01g01650 01 17678344 17682770 Bva03g00711 03 4255462 4258244 ECH