Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01649 ATGGTTGGACCAGATAACAAGAGCGTGGGAGAGAGCCTATTACCAGAAGAGATAGAAGTGAAAGCAGATCAGATTACATGGAATGCTTTGAACCAAGAAGTGAAGAGGATTTGTTGCATTGCAGCACCAATGGTGCCTGTGATTTCTTCCCAGTTTCTGCTGAATGTTGTGACGACGATGATGGTTGGTCACCTGAGTGAGCTTTCACTCTCTAGCTCCGCCTTAGCCATCTCACTAGCTGGAGTCACTGGTTTCAGTTTCCTTTTGGGACTGGCTAGTGGACTGGAAACTCTTTGTGGACAAGCTTATGGAGCTCAGCAATATCACAGATTCGGAATACAAACATACACTGCCATGTTTTCCCTCATACTGGTCTGTCTTCCCCTGTCTCTCATTTGGATCAACATGGGAAAGATCCTAGTTTTCATGGGCCAGGATCCTCTAATCTCACAGGAAGCAGGGAAATTCATAATCTGGCTTGTTCCTGCACTTTTTGCATTTGCAATTCTGCAGCCACTGATTAGATTTTTCCTGATGCAAAGTTTGATTATTCCCATGCTCATGAGTTCGTGTGCCACTTTTTGTTTGCATATACCTCTCTGCTGGGCTTTGGTCTTTAAATCTGGACTGAATAACGTTGGTGCAGCATTGGCAATAAGTGTTTCAACATGGTTGAATGTGATTTTTCTTGGGTTGTACATGAAATATTCTCCTGCCTGTGCAAAAACCCGTGCTCCAGTTTCAGTGGAGATTTTCCATGGAATTAAGGAGTTCTTTCGATTTGCTGTCCCTTCCGCAGTAATGGTTTGCCTCGAATGGTGGTCATTTGAGCTTCTTATCTTGCTGTCTGGGTTATTGCCAAATCCCAAGCTTGAAGCCTCGGTTCTAGCTATATGCCTCAACACAACTACAGTAACCTATTCTATTGCTTATGGACTTGGTGCTGCGGCAAGTACAAGGgtttcaaatgaaataggaGCGGGGAATGCTCGTGCTGCTCGCGTTGCTGTTTTGACTGCAATTTCTCTGGCAGTCATGGGGGCAAGTTTACTATGCATAGTCCTCTTCACCTGCCGCCATGTTTATGGCTATTCTTTCAGCAATGAGAAGGAAGTTGTGGACTATGTCACTGCCATGGCTCCTCTACTTTGTGTAGCTATTATACATCAGAATTTACAAACTGTTCTTTCAGGGATTGCTAGGGGTTGTGGTGTGCAACACATAGGGGCTTACATCAATTTGGGGGCCTACTATCTCTCTGGAATTCCAGTAGCAGCTGCGTTGTGTTTCTGGGTGAAGATGAGAGGAAAGGGCCTTTGGATTGGTATACAAGTTGGCACTTTCGTGCAAATTGTTCTCCTTTCCATCATAACAAGTTGCATAAGTTGGGAGCAGCAGGCATTCAAGGCGAGAGAAAGGCTATTTGAAGGACAAGGACAACTTCCGGCAGACAATGGACTGATATG 1466 0.4441 MVGPDNKSVGESLLPEEIEVKADQITWNALNQEVKRICCIAAPMVPVISSQFLLNVVTTMMVGHLSELSLSSSALAISLAGVTGFSFLLGLASGLETLCGQAYGAQQYHRFGIQTYTAMFSLILVCLPLSLIWINMGKILVFMGQDPLISQEAGKFIIWLVPALFAFAILQPLIRFFLMQSLIIPMLMSSCATFCLHIPLCWALVFKSGLNNVGAALAISVSTWLNVIFLGLYMKYSPACAKTRAPVSVEIFHGIKEFFRFAVPSAVMVCLEWWSFELLILLSGLLPNPKLEASVLAICLNTTTVTYSIAYGLGAAASTRVSNEIGAGNARAARVAVLTAISLAVMGASLLCIVLFTCRHVYGYSFSNEKEVVDYVTAMAPLLCVAIIHQNLQTVLSGIARGCGVQHIGAYINLGAYYLSGIPVAAALCFWVKMRGKGLWIGIQVGTFVQIVLLSIITSCISWEQQAFKARERLFEGQGQLPADNGLI 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01649 488 Pfam MatE 264 425 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva01g01649 488 Pfam MatE 49 202 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva01g01649 488 CDD MATE_eukaryotic 33 467 IPR045069 GO:0042910|GO:1990961
Bva01g01649 488 PANTHER MULTIDRUG RESISTANCE PROTEIN 21 472 - -
Bva01g01649 488 PANTHER PROTEIN DETOXIFICATION 21 472 - -
Bva01g01649 488 TIGRFAM matE: MATE efflux family protein 43 440 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01649 Bva-Chr1 17671940 17675926 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01649 01 17671940 17675926 Bva01g01649 01 17671940 17675926 ECH
Bva01g01649 01 17671940 17675926 Bva03g00713 03 4263666 4266710 ECH