Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01648 ATGGCAAGAGGGGGAAACTCGAGTCTGGAGACTCCACTTTGTCCAAACCAAGATACAACAACAGACCATGAATTCTATGCTCCACCAGCTGAACAATGTTGTTGCTGCAGAGGCGATATTGTTGAAGAAGCCAAAAGGCAACTATGGCTAGCAGGGCCGCTTATTGCAGTTAGTTTGCTGCAATATAGCTTACAAGTAATATCTATCATGTTTGTTGGCCATCTTGGGAAATTGCCTCTTTCTGGTGCTTCCTTGGGCTCCTCCTTCGCCTCAGTCACTGGTTTCAGTGTCTTGTTAGGGATGGGGAGTGCATTGGAGACACTATGTGGGCAAGCCTATGGAGCCAAACAGCATCACATGCTAGGAGTTCATACACAGAGGGCAATGCTTGTTCTTCTAGGCTTGAGCATCCCCCTATCAATAATTTGGTTCTACACTGGCAACATTCTGATAACAATTGGCCAACAGCGCAACATATCAACAGAAGCAGGAACATTCAATCAATGGATGATTCCGGGCCTTTTCGCTTATGCCATCCTTCAATGCCTCAACAGATTTCTGCAGACTCAGAACAATGTTTTTCCAATGCTAATAACCTCTGGAGCCACAACTCTGGCGCATGTTCTCTTTTGTTGGGTTTTTGTGTTTCAATATAAATTAGGAAGCAAAGGAGCAGCTTTGGCAATTGCCATGTCCTATTGGGTCAATGTCTTTCTTTCGGTAGCTTACATAAATTTGGCACCAGCTTGTGCAAAAACTTGGAAAGGGTTTTCCAAAGAGGCATTTCATGATGTTCTGAGCTTTATAAAGCTTGCAGTTCCGTCTGCAATTATGATATGTTTCGAATATTGGTCCTTTGAGATGGTTGTTCTATTATCAGGTCTTCTCCCTAATCCACAAATAGAGACATCTGTATTATCAATAAGCCTGAATACATGCTGGATGGTCTATATGATCTCTGTAGGTCTTGGTGGTGCCATAAGTACAAGGGTGTCAAATGAACTGGGTGCTGGGAATGTACAAGGTGCACTTTTGGCTCTGCGGGTCATGATTGTTATTGCCATATCAGAGGGCACAATAGTAGGATTACTTACCATTTTGATACGCAATGTTTGGGGAAAGGTCTACAGTAATGAAGATGAAGTTATAAGATATGTTGCCAAGATGATGCCTCTGCTGGCACTGTCTGATTTCTTGGATGGTTTCCAATGTGTGCTTTCAGGAGCTGCTAGAGGGTGTGGTTGGCAAAATCTATGTGCATTTATAAACCTTGGAGCTTACTATGTTGTCGCCATTCCTTCTGCTGTACTGCTCTCTTTCGTCTTCCATATTGGAGGCATGGGACTTTGGATGGGAATCATCTGTGGACTCTCAGTTCAAGTGATAGCACTAGTTACAGTAAATGTTTGTACTGATTGGGATAAAgagGCAAGGAAAGCAGTGCTTGTTACTCAGAAAATTAACAGGGTTATGGAACCATA 1481 0.4288 MARGGNSSLETPLCPNQDTTTDHEFYAPPAEQCCCCRGDIVEEAKRQLWLAGPLIAVSLLQYSLQVISIMFVGHLGKLPLSGASLGSSFASVTGFSVLLGMGSALETLCGQAYGAKQHHMLGVHTQRAMLVLLGLSIPLSIIWFYTGNILITIGQQRNISTEAGTFNQWMIPGLFAYAILQCLNRFLQTQNNVFPMLITSGATTLAHVLFCWVFVFQYKLGSKGAALAIAMSYWVNVFLSVAYINLAPACAKTWKGFSKEAFHDVLSFIKLAVPSAIMICFEYWSFEMVVLLSGLLPNPQIETSVLSISLNTCWMVYMISVGLGGAISTRVSNELGAGNVQGALLALRVMIVIAISEGTIVGLLTILIRNVWGKVYSNEDEVIRYVAKMMPLLALSDFLDGFQCVLSGAARGCGWQNLCAFINLGAYYVVAIPSAVLLSFVFHIGGMGLWMGIICGLSVQVIALVTVNVCTDWDKEARKAVLVTQKINRVMEP 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01648 493 TIGRFAM matE: MATE efflux family protein 53 450 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva01g01648 493 CDD MATE_eukaryotic 43 479 IPR045069 GO:0042910|GO:1990961
Bva01g01648 493 Pfam MatE 274 436 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva01g01648 493 Pfam MatE 53 213 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva01g01648 493 PANTHER MULTIDRUG RESISTANCE PROTEIN 31 482 - -
Bva01g01648 493 PANTHER PROTEIN DETOXIFICATION 31 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01648 Bva-Chr1 17663545 17667365 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01648 01 17663545 17667365 Bva01g01648 01 17663545 17667365 ECH