Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01628 ATGGCTATTCCTTATCCCCATTTTATTGCGGCTGAGAAAGCAGCTATTGAGACGGGTCTTTTGGCCccttcttctccttcctcgTCTCTGTCTCCTCCCCCCGTGATTCTCACCCAGgatgaattgaagaaaatcGCTGCCTACAAGGCGGTCGAGTACGTCGAATCTGGCATGGTTCTGGGTTTGGGAACCGGGTCCACAGCGAAGCATGCAGTGGACCGTATCGGCGAGCTTTTGCGCCAAGGAAAGCTCAGGGACATTGTGGGAATACCCACCTCGAAGATGACCCACGAGCAAGCAGCTTCTTTGGGGATTCCATTGTCAGATCTCGATTCCCACCCAGTTGTTGATCTTGCCATTGATGGTGCCGATGAGGTGGATCCCGAATTGAATTTGGTTAAAGGGCGAGGTGGGTCGCTGTTGAGGGAGAAAATGGTCGAGGGTGCTTGTAAGAAGTTCGTAGTTATTGTGGATGAGTCCAAATTGGTGAAGTATATAGGGGGTAGTGGTCTAGCTATGCCTGTTGAGATAATACcattttgttggaaatttaCTGCTGATAGGCTGCAGAAGTTGTTTGAGGAGGCAGGTTGTGTTGCCAAGTTGAGGACTTTTCCAGGAAAGGATGAGCCTTTTGTGACAGACAACAGGAATTATATTGTAGACTTGTATTTCAAGAAGAGTATTGGTGATTTGAAGGTAGCAAGTGATGCTATTCTCCAACTTGCAGGTGTTGTGGAGCATGGAATGTTCCTGGACATGGCTACCACTGTCATCATCGCAGGTGAGCTTGGTGTAACCGTGAAGCATAAGCGTTG 818 0.4597 MAIPYPHFIAAEKAAIETGLLAPSSPSSSLSPPPVILTQDELKKIAAYKAVEYVESGMVLGLGTGSTAKHAVDRIGELLRQGKLRDIVGIPTSKMTHEQAASLGIPLSDLDSHPVVDLAIDGADEVDPELNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVKYIGGSGLAMPVEIIPFCWKFTADRLQKLFEEAGCVAKLRTFPGKDEPFVTDNRNYIVDLYFKKSIGDLKVASDAILQLAGVVEHGMFLDMATTVIIAGELGVTVKHKR 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01628 272 Pfam Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 88 263 IPR004788 GO:0004751|GO:0009052
Bva01g01628 272 CDD RPI_A 42 262 IPR004788 GO:0004751|GO:0009052
Bva01g01628 272 TIGRFAM rpiA: ribose 5-phosphate isomerase A 42 266 IPR004788 GO:0004751|GO:0009052
Bva01g01628 272 Hamap Ribose-5-phosphate isomerase A [rpiA]. 39 269 IPR020672 GO:0004751|GO:0009052
Bva01g01628 272 Gene3D - 165 249 - -
Bva01g01628 272 SUPERFAMILY D-ribose-5-phosphate isomerase (RpiA), lid domain 171 252 - -
Bva01g01628 272 PANTHER RIBOSE-5-PHOSPHATE ISOMERASE 3, CHLOROPLASTIC-RELATED 1 271 - -
Bva01g01628 272 Gene3D - 42 263 - -
Bva01g01628 272 PANTHER ISOMERASE, PUTATIVE-RELATED 1 271 - -
Bva01g01628 272 SUPERFAMILY NagB/RpiA/CoA transferase-like 38 188 IPR037171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01628 Bva-Chr1 17543248 17544716 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01628 01 17543248 17544716 Bva01g01628 01 17543248 17544716 ECH