Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01622 ATGGCTTCCACACTCCTCTTCCCTCTCATACtactcctctctctcttttcgcTCTCTTCTCCACTCTCATCATCGGCAATCCTGGATGCTGCCGAGATTCTCTCCAGTATTGGCTTCAAAACCATGGCTCTTAATCTTGAGCTCGCTTCCCAGACCCTAAACGCAGAAACTAGTTCTCTCACCATCTTCGCTCTCTCTGACACCTCCTTCAAGCATATGGGTCAGCTCCCACTCTCTCTCCTCCATTACCATCTCCTTCCTCACGCATTCTCCCTCCAGAGCCTGAACTCTCTCCCCTTTGGCGCCAAGATCGGGACAATGCTCCCGGGTCACTCCGTGGTCGTCACCACCTCGCATTTCGGCGATCGGATTGGAATCAACAACATTACGGTGAACAAACCGCCGATTTTCTATGATGGGTATCTGTCAATTTTCAGAATCAACGAGTTCTTTGATCCGTATTTTCAGATTCCCAGGAAAATCCCCAAACCCAGTTTGGGACCAGGGTGCATGCCGCTGAGAAAGAGTGAAAAAATCTGGTTTTCCGAGTCTTATTCTTTCCAGGAAGCTAGTAAGGTTCTGAGATCCAAAGGGTGCTCTATTATGGCTTCCCTTCTTGATATGCaatttcttggtcccaaagaACGCCCTCAGTTAACACTCTTTGCTCCGGTTGATGAAGGAATGGTGAATCACTTGGGCAACTTGAGCGACTACTCTTCGATTCTTCGACACCATCTTGTCCCCTGCAAGATTTTGTGGAGCGATTTGGTAACTCTCGATGACGGGTCAGAATTCTGGACTTACGAGAGAGGATTCACGATCAACGTAACCAAGTCTGGTGACATTTTGTATCTGAATGGGGTTGCTGTGATTTTCCCAGAAATGTATTACAGCGATTGGCTCGTGGTTCATGGCCTCCCAGAGATGCTTCCGGGCTCAAAGGGAAGTGTTCAAGCTGCAAAAGCAGAACATTCGAGTCAGACCCAGATGGGAAACGAGCAAGCTAGAGAACCTTCCAATGACGAGAATGAGCTTTCAGGGTCAATGACAAGAGTTCAAGATGCAGCCTATAATTGGCGTCTGGTCCATGGCGAGAAGGAGCTTTCAGGCTCAACGGGAAGATTTCAAGAAGCAGAAACAGGAATTTCGAGCCAGACCCATATGGGAGAAGAGCAAACAAGAGAGCCATCTTTCGCATTTGATCAATACAATGATAAAAATCCCGGAGCAGCTCACTACCACTTCTCTGTTTTTCATTA 1262 0.4628 MASTLLFPLILLLSLFSLSSPLSSSAILDAAEILSSIGFKTMALNLELASQTLNAETSSLTIFALSDTSFKHMGQLPLSLLHYHLLPHAFSLQSLNSLPFGAKIGTMLPGHSVVVTTSHFGDRIGINNITVNKPPIFYDGYLSIFRINEFFDPYFQIPRKIPKPSLGPGCMPLRKSEKIWFSESYSFQEASKVLRSKGCSIMASLLDMQFLGPKERPQLTLFAPVDEGMVNHLGNLSDYSSILRHHLVPCKILWSDLVTLDDGSEFWTYERGFTINVTKSGDILYLNGVAVIFPEMYYSDWLVVHGLPEMLPGSKGSVQAAKAEHSSQTQMGNEQAREPSNDENELSGSMTRVQDAAYNWRLVHGEKELSGSTGRFQEAETGISSQTHMGEEQTREPSFAFDQYNDKNPGAAHYHFSVFH 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01622 420 SMART fasc_3 61 154 IPR000782 -
Bva01g01622 420 SMART fasc_3 220 315 IPR000782 -
Bva01g01622 420 MobiDBLite consensus disorder prediction 320 349 - -
Bva01g01622 420 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 343 - -
Bva01g01622 420 SUPERFAMILY FAS1 domain 191 308 IPR036378 -
Bva01g01622 420 PANTHER OS02G0491300 PROTEIN-RELATED 3 343 - -
Bva01g01622 420 MobiDBLite consensus disorder prediction 315 349 - -
Bva01g01622 420 Gene3D FAS1 domain 186 312 IPR036378 -
Bva01g01622 420 Gene3D FAS1 domain 26 143 IPR036378 -
Bva01g01622 420 ProSiteProfiles FAS1/BIgH3 domain profile. 24 155 IPR000782 -
Bva01g01622 420 ProSiteProfiles FAS1/BIgH3 domain profile. 174 311 IPR000782 -
Bva01g01622 420 SUPERFAMILY FAS1 domain 28 151 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01622 Bva-Chr1 17502884 17504146 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01622 01 17502884 17504146 Bva01g01622 01 17502884 17504146 ECH