Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01606 ATGGTGATGGAGACTAGCAAACAGGGGTATTCGTCGTCTTACTATAGCATTCTTGGGGTTAACTCTGATTCCTCCATTGATGATATCAGGCGTGCTTATCGGAAGCTTGCTATGCAATGGCATCCAGATAGGTGGACGAGAACGCCTTCTTTGCTGGGTGAAGCCAAACGCAAATTCCAGCAAATTCAAGAAGCTTATTCAGTATTGTCTGATCCCAACAAAAGAACGTTGTATGATGCAGGCTTATATGATcctgaagaggaagaagacgaGGGCTTTTCTGATTTTGTGCAAGAAATGGTGTCTCTTATGGCTCAAGTAAAGAATGAGGAAAAGGAGTACAACATGGAGGAGTTGCAGACAATGTTCACAGAAATGGTTCAAGGATTTGATCCTCCTTGGCACTGCGGATGCTCACCTGCAGATGAATCCCAATACTCTAAGAGGACCCGCTTGGATCCCACAAACATGATGGGCAATGGCTTCAAGTTGTATGAAACAAGAGGCTACTGTAATTA 518 0.4208 MVMETSKQGYSSSYYSILGVNSDSSIDDIRRAYRKLAMQWHPDRWTRTPSLLGEAKRKFQQIQEAYSVLSDPNKRTLYDAGLYDPEEEEDEGFSDFVQEMVSLMAQVKNEEKEYNMEELQTMFTEMVQGFDPPWHCGCSPADESQYSKRTRLDPTNMMGNGFKLYETRGYCN 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01606 172 Gene3D DnaJ domain 10 132 IPR036869 -
Bva01g01606 172 PANTHER PUTATIVE, EXPRESSED-RELATED 3 163 - -
Bva01g01606 172 PRINTS DnaJ domain signature 54 74 IPR001623 -
Bva01g01606 172 PRINTS DnaJ domain signature 33 48 IPR001623 -
Bva01g01606 172 PRINTS DnaJ domain signature 15 33 IPR001623 -
Bva01g01606 172 ProSiteProfiles dnaJ domain profile. 13 82 IPR001623 -
Bva01g01606 172 Coils Coil 100 120 - -
Bva01g01606 172 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 163 - -
Bva01g01606 172 Pfam DnaJ domain 14 79 IPR001623 -
Bva01g01606 172 SMART dnaj_3 12 74 IPR001623 -
Bva01g01606 172 CDD DnaJ 14 71 IPR001623 -
Bva01g01606 172 ProSitePatterns Nt-dnaJ domain signature. 59 78 IPR018253 -
Bva01g01606 172 SUPERFAMILY Chaperone J-domain 12 85 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01606 Bva-Chr1 17355325 17357373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01606 3 80 C2H2 Transcription Factor Family AT1G74250 41.772 3.95e-15 70.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01606 01 17355325 17357373 Bva01g01606 01 17355325 17357373 ECH