Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01602 ATGATCTTAGCTTACGGCTCCGTCCGGTGGTGGAAGATATTCTCGCCGGACCAGTGCTCCGGCATCAATCGGTTCGTGGCCATCTTCGCGGTGCCTCTTCTGTCTTTCCATTTTATCTCCACCAACAACCCTTACCAGATGAACTTCCGGTTCATCGCCGCCGACACGCTCCAGAAAATCATCATGCTGTTTGCACTCGCAATCTGGACCAATTTTACCAAGAACGGTAGCCTGGAGTGGATGATTACTATTTTCTCGGTATCCACATTGCCGAACACTCTGGTCATGGGGATTCCACTGCTGATTGCTATGTATAACGACTACGCCGGCAGCCTTATGGTTCAAGTGGTGGTGCTCCAGTGCATCATCTGGTACACTCTCTTGCTCTTTCTGTTTGAATACCGCGGTGCGAAGCTCTTGATCATGGAGCAGTTTCCCGAAACGGCGGCGTCGATTGTGTCGTTTAAAGTAGATTCCGATGTGGTTTCACTCGACGGTAGGGACTTTCTTGAGACTGACGCGGAGGTCGGAGATGATGGGAAACTTCACGTGAAAGTGAGGAAATCGAACGCGTCGAGGAGGTCGTTTATGATGACTCCTCGGCCATCGAATCTCACCGGCGCTGAGATTTACAGCTTGAGTTCTTCCAGGAATCCAACGCCGAGAGGCTCGAATTTCAATCACTCCGATTTCTACTCAATGATGGGATATCCGGCGAGGCATTCTAACTTCGGTCCGGCGGATATGTACTCCGTTCAGTCGTCGCGAGGGCCAACGCCGAGGCCCTCGAATTTCGAGGAGAACTGTTCTCCAATGCCTCAAACCATCAGCTCCCCACGGTTCGGATTTTACCCAGCGCAAACGGTACCCACTTCCTACCCAGCACCCAACCCCGAATTTTCTTCCACTTTGAGCAAAAGTGTTAAGAATCAGCAGCCGATGCCAACACAGCCACAGCCGCCGCAGCAGCTTCAAGCTCAGACTCAAGCTCAAGCTACTCCTAACAGCAAAAATAGCCATGATGCTAAAGAGCTTCACATGTTTGTGTGGAGTTCAAGTGCATCGTCGGTTTCAGAAGGTGGTGGGCTCCACGTATTCGGCGGCACCGATTTCGGAACATCCGAGCAATCTGGACGCTCCGATCAGGGAGCCAAAGAGATCAGAATGTTAGTAGCTGATGATCATCCTCCAAATGGGGAAAGCAAagCCATTTCGGAGCTGGAATTTGGTGGAGAAGATTTCAAGTTGCCGGTGAAGGGAGGAGAACAaggagaggaagagagagaaaaagagggaCCTACTGGGCTTAACAAGCTGGGGTCCAGTTCAACAGCTGAGCTACACCCAAAAACCGCCGGAGGAGCAGATCCCGGTGCCGGAAAGAATATGCCTCCGGCGAGTGTGATGACCCGTCTGATACTGATCATGGTGTGGAGGAAGCTTATCCGCAACCCCAACACTTACTCAAGCCTCATTGGGGTTATTTGGTCCCTCGTAGCCTTCAGGTGGCATGTGCATAtgccaaaaataattgaaaaatcgATCTCCATTCTATCAGATGCTGGGCTTGGAATGGCTATGTTTAGCTTAGGTTTGTTTATGGCTCTTCAACCTAAACTCATTGCCTGTGGTAACTCCGTGGCTGCATTTTCCATGGCGATTCGATTCCTCACCGGCCCGGCAGTGATGGCGGCCGCTTCTGTCATAGTTGGCCTGCGTGGCACCCTTCTACATATTGCCATTGTTCAGGCTGCACTTCCTCAAGGGATTGTTCCTTTCGTGTTTGCCAAAGAATACAATGTCCATCCTGCCATTCTCAGCACAATGGTTATATTTGGAATGTTGATAGCACTACCCATCACTCTAGTCTATTACATACTCCTCGGCCTGTA 1892 0.4947 MILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFISTNNPYQMNFRFIAADTLQKIIMLFALAIWTNFTKNGSLEWMITIFSVSTLPNTLVMGIPLLIAMYNDYAGSLMVQVVVLQCIIWYTLLLFLFEYRGAKLLIMEQFPETAASIVSFKVDSDVVSLDGRDFLETDAEVGDDGKLHVKVRKSNASRRSFMMTPRPSNLTGAEIYSLSSSRNPTPRGSNFNHSDFYSMMGYPARHSNFGPADMYSVQSSRGPTPRPSNFEENCSPMPQTISSPRFGFYPAQTVPTSYPAPNPEFSSTLSKSVKNQQPMPTQPQPPQQLQAQTQAQATPNSKNSHDAKELHMFVWSSSASSVSEGGGLHVFGGTDFGTSEQSGRSDQGAKEIRMLVADDHPPNGESKAISELEFGGEDFKLPVKGGEQGEEEREKEGPTGLNKLGSSSTAELHPKTAGGADPGAGKNMPPASVMTRLILIMVWRKLIRNPNTYSSLIGVIWSLVAFRWHVHMPKIIEKSISILSDAGLGMAMFSLGLFMALQPKLIACGNSVAAFSMAIRFLTGPAVMAAASVIVGLRGTLLHIAIVQAALPQGIVPFVFAKEYNVHPAILSTMVIFGMLIALPITLVYYILLGL 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01602 630 MobiDBLite consensus disorder prediction 321 338 - -
Bva01g01602 630 MobiDBLite consensus disorder prediction 391 463 - -
Bva01g01602 630 MobiDBLite consensus disorder prediction 250 339 - -
Bva01g01602 630 MobiDBLite consensus disorder prediction 250 285 - -
Bva01g01602 630 TIGRFAM 2a69: auxin efflux carrier 1 630 IPR014024 -
Bva01g01602 630 MobiDBLite consensus disorder prediction 293 313 - -
Bva01g01602 630 Pfam Membrane transport protein 1 625 IPR004776 GO:0016021|GO:0055085
Bva01g01602 630 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 630 - -
Bva01g01602 630 MobiDBLite consensus disorder prediction 391 434 - -
Bva01g01602 630 PANTHER AUXIN EFFLUX CARRIER-RELATED 1 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01602 Bva-Chr1 17318330 17322524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01602 1 630 Organic Solute Cotransporters AT1G70940 75.781 0.0 924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01602 01 17318330 17322524 Bva01g01602 01 17318330 17322524 ECH