Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01596 ATGGAGTCAACAAGCTTCACCTCCCTCAAGTTCTGTCTCctgctcttcttcttcaaccatGCTTCAGCTTCATCCCTCTCTGCTTCAAACTCAACCCCTGTATTCCCAAAACAAGCCCTACCCACCAAATCTGGGTACCTCCCAGTCAACCCTTCTTCCAAATCCGCCATTTACTTCACATTCTACGAAGCCCAGGCCCCAAAATCCCTTCTTTCGAAAACCCCACTGGTCATTTGGCTTCAGGGTGGCCCTGGTTGCTCCTCCATGATCGGCAACTTCTTCGAGCTCGGTCCGTGGCGTGTCACCTCCGAGTCCCTCACCCTCGAGCCCAACCCAGGTGCTTGGAACAGAATCTTTGGCCTTCTTTTCCTAGATAACCCAATTGGAACTGGCTTCAGCATAGCTTCAAAACAAGAAGAGATCCCAAGAGATCAAATTTCTGTAGCAAAACACCTCTTTGCTGCTATAACCAAGTTCATCGAGCTAGACCCAGTTTTCAAAACTCGCCCAATTTACATCACCGGCGAAAGCTATGCTGGGAAGTACGTCCCAGCAATTGGGTATTACATTTTGAAGACTAACGAGAAATTGCCAGTTTCCCAAAGGTTGAATTTGGCAGGAGTGGCAATTGGGGATGGGTTAACAGACCCAGTAACCCAGGTGGCAACTCATGCTGTGAATGCCTATTATGTTGGTTTAATCAATGAAAGACAGAAGATTGAACTAGAGAAGCTTCAATTAGAGGCAGTTAGATTGACACAGAAGGGGAATTGGAGTGAAGCAAGGAAAGCCCGGAACAGGGTGCTGAGAACATTGCAGAACATTACTGGGCTAGCTACTTTGTATGATTACTCAAAGAAAGCTCCTTACAAAGATTATTTAGTTGatgaattattgaaatttggaGAAATAAAGAAGCTTTTGGGAGTGAGTGAGTCTCTTGTGTTTGAGTCTTGCAGTGATCTGGTGGGTGAAATTTTGGGAGATGATGTGATGAAGAGTGTCAAGTTTATGGCTGAATACCTAGTCAAAAATAGCAAGGTTTTGTTGTATCAAGGTCAATATGATTTGAGGGATGGAGTTCTGCAAGTTGAGGCTTGGGTGAAGACAATGAAATGGGAAGAGATTGGGGATTATCTGAATGCAGATAGGAAGATTTGGGAGGTGAATGGAGAGCTTGCTGGATATGTGCAGAAATGGAAGAGTCTCACGAATGTTGTGGTTTTGGGTGCTGGCCATCTCTTGCCTGCTGATCAAGCTTTGAATTCTCAGGCTATGATAGAAGATTGGATTTTGGAAAGGGGTTTGTTTGGCAGTGAGCAAAATGAGGGTGAATCATCAAGTGTGGGGCATAAGCTGATGTG 1364 0.4399 MESTSFTSLKFCLLLFFFNHASASSLSASNSTPVFPKQALPTKSGYLPVNPSSKSAIYFTFYEAQAPKSLLSKTPLVIWLQGGPGCSSMIGNFFELGPWRVTSESLTLEPNPGAWNRIFGLLFLDNPIGTGFSIASKQEEIPRDQISVAKHLFAAITKFIELDPVFKTRPIYITGESYAGKYVPAIGYYILKTNEKLPVSQRLNLAGVAIGDGLTDPVTQVATHAVNAYYVGLINERQKIELEKLQLEAVRLTQKGNWSEARKARNRVLRTLQNITGLATLYDYSKKAPYKDYLVDELLKFGEIKKLLGVSESLVFESCSDLVGEILGDDVMKSVKFMAEYLVKNSKVLLYQGQYDLRDGVLQVEAWVKTMKWEEIGDYLNADRKIWEVNGELAGYVQKWKSLTNVVVLGAGHLLPADQALNSQAMIEDWILERGLFGSEQNEGESSSVGHKLM 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01596 454 Gene3D alpha/beta hydrolase 22 441 IPR029058 -
Bva01g01596 454 SUPERFAMILY alpha/beta-Hydrolases 40 432 IPR029058 -
Bva01g01596 454 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 32 434 IPR001563 GO:0004185|GO:0006508
Bva01g01596 454 Pfam Serine carboxypeptidase 40 431 IPR001563 GO:0004185|GO:0006508
Bva01g01596 454 Coils Coil 235 255 - -
Bva01g01596 454 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Bva01g01596 454 PRINTS Carboxypeptidase C serine protease (S10) family signature 159 184 IPR001563 GO:0004185|GO:0006508
Bva01g01596 454 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Bva01g01596 454 PRINTS Carboxypeptidase C serine protease (S10) family signature 403 416 IPR001563 GO:0004185|GO:0006508
Bva01g01596 454 ProSitePatterns Serine carboxypeptidases, serine active site. 173 180 IPR018202 GO:0004185
Bva01g01596 454 PANTHER CARBOXYPEPTIDASE 32 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01596 Bva-Chr1 17272886 17274250 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01596 329 431 Calmodulin-binding Proteins AT2G22960 25.962 5.48e-08 50.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01596 01 17272886 17274250 Bva01g01596 01 17272886 17274250 ECH