Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01590 ATGATCGGCAACTTCTTCGAGCTCGGTCCGTGGCGTGTCACCTCCGAGTCCCTCACCCTCGAGCCCAACCCAGGTGCTTGGAACAGAATCTTTGGCCTTCTTTTCCTAGATAACCCAATTGGAACTGGCTTCAGCATAGCTTCAAAACAAGAAGAGATCCCAAGAGATCAAATTTCTGTAGCAAAACACCTCTTTGCTGCTATAACCAAGTTCATCGAGCTAGACCCAGTTTTCAAAACTCGCCCAATTTACATCACCGGCGAAAGCTATGCTGGGAAGTACGTCCCAGCAATTGGGTATTACATTTTGAAGACTAACGAGAAATTGCCAGTTTCCCAAAGGTTGAATTTGGCTGGAGTGGCAATTGGGGATGGGTTAACAGACCCAGTAACCCAGGTGGCAACTCATGCTGTGAATGCCTATTATGTTGGTTTAATCAATGAAAGACAGAAGATTGAACTAGAGAAGCTTCAATTAGAGGCAGTTAGATTGACACAGAAGGGGAACTGGAGTGAAGCAAGGAAAGCCAGGAACAGGGTGCTGAGAACATTGCAGAACATTACTGGGCTAGCTACTTTGTATGATTACTCAAAGAAAGCTCCATACAAAGATTATTTAGTTGatgaattattgaaatttggaGAAATAAAGAAGCTTTTGGGAGTGAGTGAGTCTCTTGTGTTTGAGTCTTGCAGTGATCTGGTGGGTGAAATTTTGGGAGATGATGTGATGAAGAGTGTCAAGTTTATGGCTGAATACCTAGTCAAAAATAGCAAGGTTTTGTTGTATCAAGGTCAATATGATTTGAGGGATGGAGTTCTGCAAGTTGAGGCTTGGGTGAAGACAATGAAATGGGAAGAGATTGGGGATTATCTGAATGCAGATAGGAAGATTTGGGAGGTGAAAGGAGAGCTTGCTGGATATGTGCAGAAATGGAAGAGTCTCACGAATGTTGTGGTTTTGGGTGCTGGCCATCTCTTGCCTGCTGATCAAGCTTTGAATTCTCAGGCTATGATAGAAGATTGGATTTTGGAAAGGGGTTTGTTTGGCAGTGAGCAAAATGAGGGTGAATCATCAAGTGTGGGGCATAAGCTGATGTG 1100 0.4318 MIGNFFELGPWRVTSESLTLEPNPGAWNRIFGLLFLDNPIGTGFSIASKQEEIPRDQISVAKHLFAAITKFIELDPVFKTRPIYITGESYAGKYVPAIGYYILKTNEKLPVSQRLNLAGVAIGDGLTDPVTQVATHAVNAYYVGLINERQKIELEKLQLEAVRLTQKGNWSEARKARNRVLRTLQNITGLATLYDYSKKAPYKDYLVDELLKFGEIKKLLGVSESLVFESCSDLVGEILGDDVMKSVKFMAEYLVKNSKVLLYQGQYDLRDGVLQVEAWVKTMKWEEIGDYLNADRKIWEVKGELAGYVQKWKSLTNVVVLGAGHLLPADQALNSQAMIEDWILERGLFGSEQNEGESSSVGHKLM 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01590 366 ProSitePatterns Serine carboxypeptidases, serine active site. 85 92 IPR018202 GO:0004185
Bva01g01590 366 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 3 346 IPR001563 GO:0004185|GO:0006508
Bva01g01590 366 Gene3D alpha/beta hydrolase 1 353 IPR029058 -
Bva01g01590 366 PANTHER CARBOXYPEPTIDASE 3 346 - -
Bva01g01590 366 SUPERFAMILY alpha/beta-Hydrolases 1 344 IPR029058 -
Bva01g01590 366 Pfam Serine carboxypeptidase 1 343 IPR001563 GO:0004185|GO:0006508
Bva01g01590 366 PRINTS Carboxypeptidase C serine protease (S10) family signature 71 96 IPR001563 GO:0004185|GO:0006508
Bva01g01590 366 PRINTS Carboxypeptidase C serine protease (S10) family signature 23 35 IPR001563 GO:0004185|GO:0006508
Bva01g01590 366 PRINTS Carboxypeptidase C serine protease (S10) family signature 36 46 IPR001563 GO:0004185|GO:0006508
Bva01g01590 366 PRINTS Carboxypeptidase C serine protease (S10) family signature 315 328 IPR001563 GO:0004185|GO:0006508
Bva01g01590 366 Coils Coil 147 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01590 Bva-Chr1 17254832 17255932 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01590 241 343 Calmodulin-binding Proteins AT2G22960 25.000 1.52e-07 49.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01590 01 17254832 17255932 Bva01g01590 01 17254832 17255932 ECH