Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01578 ATGGATCAAAAcggcagcagcagcagcaacaccAACACCATGCGTTCTCATTGCATAGAGATAAATGAcaatgaagaatttgaagtgcACAAAGTTGAGGCACCACCCCAGAAGAGCACTCTGCTGAAGCTCAAAGCCAGGCTCAAGGAAACCTTCTTCCCCGACGACCCTCTTCGCCAATTCAAGGGACAGCCATTGCCGAAGAAGCTCATACTTGGAGCTCAGTATTTTTTCCCTATTCTTCAATGGGGTCCTAGCTATAGCTTCAAGCTCTTGAAATCTGACATTGTTTCTGGCCTCACCATTGCTAGCTTGGCCATTCCCCAGgGTATCAGTTATGCTAAGCTTGCAAGCCTTCCACCCATTGTTGGACTCTATTCTAGTTTTGTTCCTCCTCTGGTGTATGCTGTTCTTGGAAGCTCAAGGGACGTGGCTGTGGGACCTGTATCTATTGCTTCACTTGTGATGGGATCCATGTTGAGAGAGGAAGTGTCTCCCACGGGAGATTCTCTTCTGTTTCTTCAGCTTGCTTTAACTTCAACTTTCTTTGCTGGTATCTTTCAAGCTTCTCTTGGAATTTTAAGGCTGGGGTTTATTATTGACTTCCTATCAAAGGCTATCCTTATTGGATTCATGGCTGGAGCTGCCATAATAGTGGCTTTGCAGCAGCTTAAGAGCCTTCTTGGAATCACACACTTCACTCAACAAATGGCCATAGTCCCTGTTATGTCTTCTGTTTTCCATAACGTTGATGAGTGGTCATGGCAAACGATAGTGATGGGCTTTTGCTTCTTGGTGTTACTTCTATTGGCAAGACACGTTAGTATAAGGAATCCAAAGCTGTTCTGGGTCTCAGCTGGAGCTCCTCTTGTGTCTGTCATCATCTCTACAGTCCTGGTTTTTGCAATCAAGGGCCAAAAGCATGGCATCAGTGTAATTGGAAAATTGGAAGAAGGATTAAATCCTCCTTCATTAAATATGCTGCGCTTTCAAGGATCCCATCTGGTTCTGGTCATTAAAACTGGCATTATGACAGGCATTTTATCCCTTACTGAAGGCATTGCAGTAGGAAGGACATTTGCTACTCTCAAGAACTACAGAGTAGATGGAAACAAGGAGATGATGGCAATAGGATTCATGAACGTGGTTGGCTCTGTCACTTCTTGCTACGTCACAACAGGTTCTTTCTCGCGGTCGGCTGTAAATCACAATGCAGGTGCAAAGACAGCAGTGTCCAATGTTGTCATGTCAGTGACAGTGATGGTGACGCTTCTGTTTCTTATGCCATTGTTCCATTACACACCAAATCTGATATTGGGGGCAATCATAGTTTCAGCAGTAGTTGGCCTCATTGACATTTCTGCGGCTTATAACATTTGGAAGATCgataaatatgatttcatCACAACGTTGGCTGCATTCTTTGGAGTTATCTTCATCTCTGTCCAAACAGGCCTAGCTATTGCCGTTGGGTTGGCAATCTTCAAGATCCTTCTGCAAGTTACAAGGCCTAAAACAGTGATGCTGGGGAACATGCCGGGGACAGACATATACCGCGATCTTCATCATTATAAGGAAGCTACAAGAGTACCAGGTTTCCTCATTTTGAGCATCGAAGCTCCCATCAATTTTGCCAACATCAACTATCTCAATGAAAGgATTTCTAGATGGATAGAGgaatttgaagaagaagataacaTAAAGCAACGACAGTCAAGCCTTCGGTTTGTGATTCTTGAAATGTCAGCTGTAACCGCCATTGACACAAGTGGAGTCTCATTCTTCAAGGATATGAAAACGGCCATGGAAAAGAAGGGTGTCGCTTTTGTGTTGGTGAATCCTTTGGCTGAGGTGATTGATAAGCTGGAGAAAGCAGATAAAGTTAATGATTTCATTAGAGAAAATAATCTTTACTTAACGGTTGGAGAAGCTGTTACTGCACTTTCATTAGAAGTAAAGGACCAACAATCATCCATGCAAGATGTGCCTCTTTA 1994 0.4183 MDQNGSSSSNTNTMRSHCIEINDNEEFEVHKVEAPPQKSTLLKLKARLKETFFPDDPLRQFKGQPLPKKLILGAQYFFPILQWGPSYSFKLLKSDIVSGLTIASLAIPQGISYAKLASLPPIVGLYSSFVPPLVYAVLGSSRDVAVGPVSIASLVMGSMLREEVSPTGDSLLFLQLALTSTFFAGIFQASLGILRLGFIIDFLSKAILIGFMAGAAIIVALQQLKSLLGITHFTQQMAIVPVMSSVFHNVDEWSWQTIVMGFCFLVLLLLARHVSIRNPKLFWVSAGAPLVSVIISTVLVFAIKGQKHGISVIGKLEEGLNPPSLNMLRFQGSHLVLVIKTGIMTGILSLTEGIAVGRTFATLKNYRVDGNKEMMAIGFMNVVGSVTSCYVTTGSFSRSAVNHNAGAKTAVSNVVMSVTVMVTLLFLMPLFHYTPNLILGAIIVSAVVGLIDISAAYNIWKIDKYDFITTLAAFFGVIFISVQTGLAIAVGLAIFKILLQVTRPKTVMLGNMPGTDIYRDLHHYKEATRVPGFLILSIEAPINFANINYLNERISRWIEEFEEEDNIKQRQSSLRFVILEMSAVTAIDTSGVSFFKDMKTAMEKKGVAFVLVNPLAEVIDKLEKADKVNDFIRENNLYLTVGEAVTALSLEVKDQQSSMQDVPL 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01578 664 CDD STAS_SulP_like_sulfate_transporter 524 640 - -
Bva01g01578 664 PANTHER SULFATE TRANSPORTER 28 651 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bva01g01578 664 PANTHER BNAA09G30120D PROTEIN 28 651 IPR030313 -
Bva01g01578 664 TIGRFAM sulP: sulfate permease 79 644 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bva01g01578 664 Pfam STAS domain 524 644 IPR002645 -
Bva01g01578 664 Pfam Sulfate permease family 92 472 IPR011547 GO:0016021
Bva01g01578 664 ProSitePatterns SLC26A transporters signature. 121 142 IPR018045 GO:0008271|GO:0008272
Bva01g01578 664 Gene3D STAS domain 503 650 IPR036513 -
Bva01g01578 664 ProSiteProfiles STAS domain profile. 523 648 IPR002645 -
Bva01g01578 664 SUPERFAMILY SpoIIaa-like 528 648 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01578 Bva-Chr1 17162658 17170898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01578 28 649 Inorganic Solute Cotransporters AT3G15990 66.774 0.0 853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01578 01 17162658 17170898 Bva01g01578 01 17162658 17170898 ECH