Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01576 ATGCACCCATATAACCGGCTACCCAGTAGTGGCCACTCCACCCCGTCGCCGCCGCCGTCGCCGCTCCGCTCTCCCAGGCTCCACCGCAGCCGGTCCAAAACTGGGAGGTTCCCTCCCGGTCAGCCGGGCAGGACGTTTGCGCAGCGTCTCTCTTGGATCTTTCTCTCCGTTTTACTTCGCCGCCAGGGCGTGTTCCTATTTGCGCCTCTCATCTACATCTCCGGAATGCTCCTTTACATGGGTACTGCCTCATTCGACGTCGTTCCTGTCATCAAGCACCGGCCTGCACCTGGGTCTGTATATCGAAGCCCCGAGCTGTATGCCAAGCTCCTCCCCGAGATGGATGCCGATAATTCTTCTCTTGATGCGATATCAACTATTTGGAAGAATCCCCATAGAGGTGGTGAATGGAAACCATGTGTAAACAAATCTTCAGAAGaTTTACCAGAATCAAATGGTTACATATATGTTGAGGCTAATGGTGGCTTAAATCAACAAAGAACATCAATATGCAATGCTGTTGCTGTGGCTGGCTATCTCAATGCTACACTTCTGATCCCCAACTTCCATTATCATAGCATATGGAAAGATCCTAGTAAATTCAGAGACATTTACGATGAAGCATATTTTATCAATACCTTGAAAAATGATGTACGGGTGGTGGATAAGATTCCTGAGTACCTAATGGAAAGATTTGGCAGCAATATGACAAATGTTTACAATTTCAGGATAAAGGCATGGTCATCCATTCAGTATTACAGAGATGTGGTGCTCCCAAAGTTACTTGAGGAAAAGGTTATAAGGATTTCTCCTTTTGCAAATAGATTATCATTTGATGCCCCTCCAGCCGTCCAACGGCTCAGATGTTTAGCAAATTATGAGGCTTTACGGTTTTCAAATCCTCTACTGACATTAGGTGAATCTTTAGCTGCTAGAATGAGAAAACGTAGTGCAGTTAATGGTGGCAAATATGTCTCCATACATCTTCGTTTTGAAGAGGATATGGTTGCTTTTTCTTGTTGTGTTTTTGATGGTGGTaaacaagagagagaagacATGAAAGCAGCAAGAGAAAGAGGGTGGAAAGGGAAGTTCACAAAACCGGGACGAGTTATACGTCCTGGAGCAATTAGGATCAATGGGAAGTGTCCCCTCACTCCTTTGGAGGTAGGGTTGATGCTTAGGGGAATGGGTTTTGATAAGGGTACATCTATTTATTTAGCGtctggaaaaatatataatgctGCGAAAACAATGGCTCCATTACTGGAAATGTTTCCTAATTTGCAAACTAAGGAGACTCTGGCTTCTGCAGAGGAACTTGCTCCTTATCAGAACTTTTCTTCCAGGATGGCTGCCATAGACTACACCGTTTGTCTTCATAGTGAGGTGTTTGTCACAACTCAAGGTGGTAACTTCCCTCATTTTCTCTTGGGCCACAGAAGATACTTGTATGGTGGACATGCTAAGACAATTAGGCCCGACAAGCGGAAGTTAGCATTACTCTTTGATAATCCCAATATTGGATGGAAAAGTTTCAAACGTCAATTGCTGAATATGAGGGCACATAGCGATTCCAAGGGATTTGAGCTCAAAAGACCAAATGACTCAATATACAGCTTTCCATGCCCAAATTGCATGTGCCGTGCAAATAGAACAGATGATTCAAAATCTTCATCAGCAGCTTG 1688 0.436 MHPYNRLPSSGHSTPSPPPSPLRSPRLHRSRSKTGRFPPGQPGRTFAQRLSWIFLSVLLRRQGVFLFAPLIYISGMLLYMGTASFDVVPVIKHRPAPGSVYRSPELYAKLLPEMDADNSSLDAISTIWKNPHRGGEWKPCVNKSSEDLPESNGYIYVEANGGLNQQRTSICNAVAVAGYLNATLLIPNFHYHSIWKDPSKFRDIYDEAYFINTLKNDVRVVDKIPEYLMERFGSNMTNVYNFRIKAWSSIQYYRDVVLPKLLEEKVIRISPFANRLSFDAPPAVQRLRCLANYEALRFSNPLLTLGESLAARMRKRSAVNGGKYVSIHLRFEEDMVAFSCCVFDGGKQEREDMKAARERGWKGKFTKPGRVIRPGAIRINGKCPLTPLEVGLMLRGMGFDKGTSIYLASGKIYNAAKTMAPLLEMFPNLQTKETLASAEELAPYQNFSSRMAAIDYTVCLHSEVFVTTQGGNFPHFLLGHRRYLYGGHAKTIRPDKRKLALLFDNPNIGWKSFKRQLLNMRAHSDSKGFELKRPNDSIYSFPCPNCMCRANRTDDSKSSSAA 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01576 562 PIRSF UCP009360 26 552 IPR024709 -
Bva01g01576 562 PANTHER - 1 561 IPR024709 -
Bva01g01576 562 MobiDBLite consensus disorder prediction 1 42 - -
Bva01g01576 562 PANTHER PROTEIN ESMERALDA 1 1 561 - -
Bva01g01576 562 CDD O-FucT_plant 154 488 IPR024709 -
Bva01g01576 562 Pfam GDP-fucose protein O-fucosyltransferase 154 484 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01576 Bva-Chr1 17146791 17152415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01576 119 549 Miscellaneous Gene Families AT1G22460 38.053 6.23e-92 291
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01576 01 17146791 17152415 Bva01g01576 01 17146791 17152415 ECH