Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01560 ATGGAGGAAATTCTGGGTCTTCTCATACTTCGTATCAAAAGAGGTATTAACCTTGCAATTCGCGATACCCGTAGCAGTGACCCTTACGTGGTTGTTCAATTGGATGACCAGAAACTGAAGACTCGTGTTGTGAAAGCTAACATCAATCCCCgttggaatgaagaaatgAGACTTTTTATTAAGGATGTGAACGTTCCTATTCATCTATCAGTTTTTGACAAGGATACTTTCACTGGTGATGACAAAATGGGGGACGCAGACATAGACTTGGGACCCTATGCCGAGTGTGCGAAGATGAGTATGTCAAAGCTTCCAAATGGGTGTGCACTCAAGAGAGTTCAACCTTCTAGGAGCAACAGCTTAGCTGAGGAGAGTTCCTGCATTTGGACTAATGGAAAAATTATCCAGGAAATGACTCTTAGGTTGAAAAATGTGGAGTCTGGTGAAGTAGTTGTGGAAATTGAGTGGCAAGACCTCCCAGGTTGTAAGGGCTTAGCAGATTCAGATTA 509 0.4165 MEEILGLLILRIKRGINLAIRDTRSSDPYVVVQLDDQKLKTRVVKANINPRWNEEMRLFIKDVNVPIHLSVFDKDTFTGDDKMGDADIDLGPYAECAKMSMSKLPNGCALKRVQPSRSNSLAEESSCIWTNGKIIQEMTLRLKNVESGEVVVEIEWQDLPGCKGLADSD 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01560 169 CDD C2_ArfGAP 5 148 - -
Bva01g01560 169 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 163 IPR044562 -
Bva01g01560 169 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Bva01g01560 169 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 151 IPR035892 -
Bva01g01560 169 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 10 1 163 - -
Bva01g01560 169 SMART C2_3c 7 102 IPR000008 -
Bva01g01560 169 Gene3D C2 domain 4 160 IPR035892 -
Bva01g01560 169 Pfam C2 domain 7 92 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01560 Bva-Chr1 17036520 17038695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01560 38 166 C2H2 Transcription Factor Family AT1G70790 64.885 2.20e-58 177
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01560 01 17036520 17038695 Bva01g01560 01 17036520 17038695 ECH
Bva01g01560 01 17036520 17038695 Bva13g01310 13 6728354 6730046 ECH
Bva01g01560 01 17036520 17038695 Bva04g00616 04 4063904 4069184 ECH