Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01555 ATGAAAAGGGAACATCATCAGCTTTATTCGAATCCTTTAGACCCATCCATGGCTGCCAGTGGAAGCTCCTCTAGCGGCGGCGGCGTTGCAAGTGGGTATTCCATGGCAACCACCAACTCCACCGGAAAATCGAAGCTTTGGGATGATGAGGTACAAGACGGTGGCATGGACGAGCTTCTGGCTGTGCTTGGGTACAAGGTGAGGTCGTCGGATATGGAGGAAGTGGCCCAGAAGCTGGAACAGCTCGAGGAAGCTATGGGGAATGTTCAAGATGGTATCTCTCAGCTCTCATCGGAAACCGTCCATTACAATCCCTCCGATCTGTCTACCTGGGTTGAAAGCATGCTTTCTGAGCTGAACCCGACTCCCAATTTCCCAGGCCCACCTTCTTCCCTCGACGATTCCTTCTTAGCTCCGGCGGAATCCTCTACCATAACCTCCATTGATTTCACCGACCATAGCCAGAACCATCAACATCAGCTTATGAATTATCCTTTTGAAGATGCTTCTTCGTCAGATTACGATCTCAAAGCTATTCCTGGTAAAGCAATCTATAGCCAAACCCAGCATCTTGAATCTCCCTCTTCCAGAGATTCCAAACGCTTGAAAACCTCAAACCAAGAATTGTTCGCGCCCTCTTCTGTTGGGGCTTTCGGTATGTCCAGTGAGTCAACTCGCCAAGTGGTCCTGGTAGACTCACAGGAAAATGGAATTCGACTCGTTCACGCATTGATGGCTTGCGCAGAAGCTGTTCAAACGAACAATTTCAACCTTGCAGAAGCTCTGGTGAAGCAGATCGGATACTTAGCAACTTCTCAAGCTGGTGCCATGAGAAAGGTCGCTACCTACTTCGCCGAAGCACTTGCCCGGAGAATCTACAGGCTCTCCCCGGAAGCCCCACTTGATCACTCCTTCTCCGATATTCTTCAACTTCATTTCTATGAGACTTGCCCTTACCTGAAATTCGCACACTTTACAGCAAACCAAGCCATTCTCGAAGCCTTCGAAGGCAAAAAGCGTGTCCATGTAATCGATTTCAGCATGAACCAGGGGATGCAATGGCCGGCTCTGATGCAAGCCCTAGCTCTCCGACCGGGGGGTCCACCAGCTTTCCGGTTAACCGGAATTGGGCCGCCCGCCCCGGATAATTCGGACCATCTTCAGGAAGTGGGTTGGAAACTCGCCCAATTAGCAGAAACGATTCACGTTGAGTTCGAGTACAGAGGATTCGTTGCCAATAGCTTGGCAGACCTCGACGCGTCTATGCTCGAACTCAGACCGAGTGAGGTTGAGTCGGTTGCGGTTAACTCGGTATTCGAATTGCACAAACTCTTGGCCCGACCCGGGGCCATTGAGAGGGTGCTGTCGGTGGTGAAGCAGATTAAGCCGGAGATTGTGACCATCGTCGAGCAAGAAGCGAACCACAACAGTCCGGTGTTCCTCGACCGGTTCACCGAGTCACTGCACTATTACTCGACTCTATTCGACTCGCTGGAGAGTTCGGTCAACACCCAGGATAAGGTCATGTCCGAAGTTTACCTGGGGAAGCAAATCTGCAATGTGGTAACCTGTGAAGGACTGGACCGAGTCGAGCGCCATGAGACTCTTGCTCAATGGAGGACCCGGTTGAGTTCGGCCGGGTTTGACCGAGTTCACCTCGGTTCCAATGCTTTCAAGCAAGCTAGCATGTTACTTGCCCTTTTCGCAGGCGGTGATGGATACAGAGTGGAAGAGGACAATGGGTGCTTGATGCTGGGTTGGCACACTCGCCCACTCATCGCCACCTCGGCGTGGCAACTCAGCAAAAACTG 1811 0.5168 MRKVATYFAEALARRIYRLSPEAPLDHSFSDILQLHFYETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAPDNSDHLQEVGWKLAQLAETIHVEFEYRGFVANSLADLDASMLELRPSEVESVAVNSVFELHKLLARPGAIERVLSVVKQIKPEIVTIVEQEANHNSPVFLDRFTESLHYYSTLFDSLESSVNTQDKVMSEVYLGKQICNVVTCEGLDRVERHETLAQWRTRLSSAGFDRVHLGSNAFKQASMLLALFAGGDGYRVEEDNGCLMLGWHTRPLIATSAWQLSKN 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01555 327 ProSiteProfiles GRAS family profile. 1 323 IPR005202 -
Bva01g01555 327 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 324 IPR005202 -
Bva01g01555 327 PANTHER DELLA PROTEIN GAI1-RELATED 1 324 IPR030006 GO:0003712|GO:0005634
Bva01g01555 327 Pfam GRAS domain family 1 323 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01555 Bva-Chr1 16977603 16979876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01555 1 327 GRAS Transcription Factor Family AT1G14920 84.756 0.0 594
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva01g01555 GRAS 2.3e-126 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01555 01 16977603 16979876 Bva01g01555 01 16977603 16979876 ECH