Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01547 ATGGGTACGCTTCAGACTTGGAGAAAAGCCTATGGTGCCATCAAGGATTCCACCAAAGTAGGCCTTGCCCATGTCAATAGCGATTACGCGGATTTGGATGTTGCCATAGTCAAGGCTACGAACCACGTCGAGTGTCCCCCCAAAGAGAGACACCTCAGGAAAATTCTTCTTGCCACGTCTGCTATTCGACCACGGGCTGATGTTGCTTACTGCATTCATGCACTTTCCCGTAGATTGGCCAAGACACGAAATTGGACGGTGGCATTGAAAACACTGATAGTCATCCATAGGTTATTGAGGGAGGGCGACCCTACTTTCAGGGAAGAGCTCTTGAATTTCTCACTGAGAGGACGCATTCTTCAACTTTCTAATTTCAAGGATGATTCTAGCCCAATTGCTTGGGATTGCTCTGCCTGGGTACGTACTTATGCATTATTTTTGGAAGAAAGACTTGAATGTTTCTGGGTTCttaaatatgatattgaaGCCGAGCGTCTTCCCAAGCCTGCAGCTCAAGGGCAAGATAAGGTCAGTTCCTCTGTATATCTGGCACTGAAGGCCATTGCATACTTGCCCCAATTTGTATTTAGCATAGGGTACAGCAGGACCAGGGATTTGGATAGTGAGGAATTGTTGGAGCAGTTGCCGGCTTTGCAGCAGTTGCTTTATCGGCTTGTGGGTTGCCGGCCAGAAGGAGCAGCTGTTCACAATTATGTGATACAATACGCCCTGGCCCTGGTGCTGAAAGAGAGCTTTAAGATTTATTGCGCTATTAATGATGGAATTATCAATCTTGTTGATAAGTTTTTTGAGATGCCCAGACATGAAGCCATTAAGGCCCTTGATGTTTATAAACGTGCTGGACAGCAGGCAGCAAGTCTATCTGATTTCTATgacgtctgcaaaggattggAACTGGCTAGGAATTTTCAGTTTCCTGTCTTAAGAGAGCCGCCTCAATCTTTTCTTACAACCATGGAAGAGTACATAAAGGAGGCACCAAGAGTGGTTACAGTTCCAAGCGAGCCATTGCTTCAGTTGACATATAGACAAGAAGATGAAGTTCTTGCAATCGAAGACACTAAAGTAACTGTTGAAGAACAGGAGCCATCAGTGCCGGTTGATGATGTAGTTGTCCCCAATCCGGAGCCTGCTCAACCTCCTCCCCCAGCTCAAAACAATTTCGAAACTGGGGACTTACTGGGATTGAGTGATACTATTACACCAGATGCATCACTAATAGAGGAAAGAAATGCTTTGGCTCTAGCCATAGTTCCCACTgaaaatgGCACTGCATCAACTTTTGACTCACGCTCTGCTCAAGCTAAAGATTTTGATCCTACCGGATGGGAGCTTGCTCTGGTCACCACTCCAAGTACCAACATTTCTTCAGTCAACGAGAGACAATTGGCTGGTGGGTTGGACTCCCTCACTCTCAACAGCTTATACGATGAAGCAGCATATAGATCTGCTCAGCGGCCGGTATACGGAGCCCCGGCTCTGGCCCCGAATCCATTTGAAGTGCAAGATCCATTTGCTTTGTCAAGGAGCATCCCTCCCCCAACGAATGTCCAAATGGCAGGAATGGTTCAGCAGCAAGCAAATCCATTTGGTCCTTACCAACCACCATATCAGCCACAACCACAGCAGCATAATATGCTGGTGACTCCCACAAACCCCTTCGGCGACGTAGGAGGGTTTCCGGCATTTCCAGTGAATCCCAGCTCTCATCcacaaaataataatccaTTCAGCACAGGCTTGTTGTA 1769 0.4568 MGTLQTWRKAYGAIKDSTKVGLAHVNSDYADLDVAIVKATNHVECPPKERHLRKILLATSAIRPRADVAYCIHALSRRLAKTRNWTVALKTLIVIHRLLREGDPTFREELLNFSLRGRILQLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFWVLKYDIEAERLPKPAAQGQDKVSSSVYLALKAIAYLPQFVFSIGYSRTRDLDSEELLEQLPALQQLLYRLVGCRPEGAAVHNYVIQYALALVLKESFKIYCAINDGIINLVDKFFEMPRHEAIKALDVYKRAGQQAASLSDFYDVCKGLELARNFQFPVLREPPQSFLTTMEEYIKEAPRVVTVPSEPLLQLTYRQEDEVLAIEDTKVTVEEQEPSVPVDDVVVPNPEPAQPPPPAQNNFETGDLLGLSDTITPDASLIEERNALALAIVPTENGTASTFDSRSAQAKDFDPTGWELALVTTPSTNISSVNERQLAGGLDSLTLNSLYDEAAYRSAQRPVYGAPALAPNPFEVQDPFALSRSIPPPTNVQMAGMVQQQANPFGPYQPPYQPQPQQHNMLVTPTNPFGDVGGFPAFPVNPSSHPQNNNPFSTGLL 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01547 589 Gene3D ANTH domain 199 346 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Bva01g01547 589 SUPERFAMILY GAT-like domain 201 332 - -
Bva01g01547 589 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Bva01g01547 589 PANTHER CLATHRIN ASSEMBLY PROTEIN 196 572 IPR045192 GO:0048268|GO:0072583
Bva01g01547 589 SUPERFAMILY ENTH/VHS domain 31 162 IPR008942 -
Bva01g01547 589 PANTHER OS05G0549000 PROTEIN 1 179 - -
Bva01g01547 589 PANTHER OS05G0549000 PROTEIN 196 572 - -
Bva01g01547 589 MobiDBLite consensus disorder prediction 573 589 - -
Bva01g01547 589 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 179 IPR045192 GO:0048268|GO:0072583
Bva01g01547 589 MobiDBLite consensus disorder prediction 570 589 - -
Bva01g01547 589 SMART enth_2 30 161 IPR013809 -
Bva01g01547 589 Gene3D - 6 161 IPR008942 -
Bva01g01547 589 Pfam ANTH domain 31 332 IPR011417 GO:0005543
Bva01g01547 589 CDD ANTH_N 32 154 - -
Bva01g01547 589 MobiDBLite consensus disorder prediction 366 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01547 Bva-Chr1 16913856 16920479 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01547 01 16913856 16920479 Bva01g01547 01 16913856 16920479 ECH