Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01388 ATGTCAACCTTGGTGATACCTCAGGGATCAATATCATCTCGAGATGATGCTGCCAAGCTGCGCAAAGCTTTCAAAGGAATTGGCTGTGATACATCTAAAGTTATCAAAATCCTTGCCCACAGAAATTATGAACAAAGAGACCTCATTCAACAAGAGTATGAGACTTCATTTTCTGAACCACTTACCAAAAGGATGTCATCAGAACTTCATGGAAATCTCAAGAAGGCAGTGTTACTTTGGATACTTGATCCTGCAACTAGAGATGCTACCGCATTAAAGCAGGCCATAAATTCACCTGTTCCTGATCTTCAAGCTATAACTGAAGTAATATGTACTCGTTCCCCATCACAAATAAGGAGATTTAAAGAGATTTACTTGTCACAATTTCATTCACATCTTGAGAAGGACATTGAAGTGACTGCATTTGGAGATCACAAGAAGTTGTTGATCCAGTATGTAACTACACCACGTTATGATGGCCCAGAATTGGATGACCTTTTAGTAGAGAAGGATGCCCAAGAGCTTCATAAATGCAGTGACAATActttaataagaatatttagTGAAAGAAACAGCACACACATGGCTGCAGTTAGCCAAGCTTATCAAAGCAGCTTCGGACACTCGTTGGAAAAGGCAATAAAGAAACAGACATCTAGCCATTTTAGGGGTGGCCTCTTGACCATACTTCGATATGCTATTAACCCTTCATATTATTTTGCTAAGATATTGCGTAAGTCAATGAAGGGTATTGGAACTGATGACAGTAGACTATTAAGAGTGATTGTGACAAGGGCTGAGGTTGATATGGTTCAGATAAAAGCAGCATATTATAGCAGATATGGGAGGAGATTGAAGACTGATGTCAAGTCAGATACTTCTGGCCATTACAAGGACTTTTTAGTTGCTCTCTTAGGTCCCTG 923 0.3911 MSTLVIPQGSISSRDDAAKLRKAFKGIGCDTSKVIKILAHRNYEQRDLIQQEYETSFSEPLTKRMSSELHGNLKKAVLLWILDPATRDATALKQAINSPVPDLQAITEVICTRSPSQIRRFKEIYLSQFHSHLEKDIEVTAFGDHKKLLIQYVTTPRYDGPELDDLLVEKDAQELHKCSDNTLIRIFSERNSTHMAAVSQAYQSSFGHSLEKAIKKQTSSHFRGGLLTILRYAINPSYYFAKILRKSMKGIGTDDSRLLRVIVTRAEVDMVQIKAAYYSRYGRRLKTDVKSDTSGHYKDFLVALLGP 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01388 307 Pfam Annexin 87 150 IPR018502 GO:0005509|GO:0005544
Bva01g01388 307 Pfam Annexin 16 79 IPR018502 GO:0005509|GO:0005544
Bva01g01388 307 Pfam Annexin 239 304 IPR018502 GO:0005509|GO:0005544
Bva01g01388 307 Pfam Annexin 178 229 IPR018502 GO:0005509|GO:0005544
Bva01g01388 307 Gene3D Annexin 1 82 IPR037104 GO:0005509|GO:0005544
Bva01g01388 307 SUPERFAMILY Annexin 2 306 IPR037104 GO:0005509|GO:0005544
Bva01g01388 307 SMART annex3 28 80 IPR018502 GO:0005509|GO:0005544
Bva01g01388 307 SMART annex3 252 304 IPR018502 GO:0005509|GO:0005544
Bva01g01388 307 SMART annex3 177 229 IPR018502 GO:0005509|GO:0005544
Bva01g01388 307 SMART annex3 102 152 IPR018502 GO:0005509|GO:0005544
Bva01g01388 307 Gene3D Annexin 83 153 IPR037104 GO:0005509|GO:0005544
Bva01g01388 307 PANTHER ANNEXIN 9 306 - -
Bva01g01388 307 PRINTS Annexin family signature 25 47 IPR001464 GO:0005509|GO:0005544
Bva01g01388 307 PRINTS Annexin family signature 292 305 IPR001464 GO:0005509|GO:0005544
Bva01g01388 307 PRINTS Annexin family signature 248 268 IPR001464 GO:0005509|GO:0005544
Bva01g01388 307 PRINTS Annexin family signature 92 113 IPR001464 GO:0005509|GO:0005544
Bva01g01388 307 PRINTS Annexin family signature 65 81 IPR001464 GO:0005509|GO:0005544
Bva01g01388 307 PANTHER ANNEXIN 9 306 - -
Bva01g01388 307 ProSiteProfiles Annexin repeat profile. 154 231 IPR018502 GO:0005509|GO:0005544
Bva01g01388 307 Gene3D Annexin 157 235 IPR037104 GO:0005509|GO:0005544
Bva01g01388 307 ProSiteProfiles Annexin repeat profile. 11 82 IPR018502 GO:0005509|GO:0005544
Bva01g01388 307 ProSitePatterns Annexin repeat signature. 252 304 IPR018252 GO:0005509|GO:0005544
Bva01g01388 307 Gene3D Annexin 236 306 IPR037104 GO:0005509|GO:0005544
Bva01g01388 307 ProSiteProfiles Annexin repeat profile. 235 306 IPR018502 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01388 Bva-Chr1 15229143 15232404 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01388 01 15229143 15232404 Bva01g01388 01 15229143 15232404 ECH