Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01339 ATGGAGAACAACCCAGTTCAGCTTTTTCATCATCTTGCTCTAACACTTCTCTTTATGATAACTATTTTGTTTCCTGCAACAGAAGAAGCTTCAGTTTCTTCTATCAGAACAGATGCGGAAGGTCTTCTTGCCTTTAAGAAGATGATTCAGAAGGACCCAAATGGAATTTTATCTTCATGGAAGCTGACAAGAAATCCATGCAGCTGGTATGGAGTTTCCTGCACTCAAGGACGAGTAACTCAGCTTGATATCAGTGAAAATAGTCTTGAAGGCATTGTTTCTCTGGATCCTTTTGCCTCTTTGAATATGCTGTCTGTTCTAAAACTCAGTTTGAATTCCTTTGTTGTAAATTCCACTTCTTTGCTTCAGCTTCCTTATAGTTTGACACAGCTTGATATCTCCTATGCTGGAGTTTCAGGTCCTGTCCCTGAGAATCTCTTCTCTAAGTGTCCAAATCTTCTTGTTGTTTATCTTTCTGGCAACAACATGACAGGTCCTataccagaaaatttctttcaaagtgCTGAGAAACTGCAGAGTCTTGACCTGTCTTCTAACAATTTGACGGGTTCGATTTCGGGTCTGAAATTTGGATGCAATTCCTTGATTGATATCAATCTATCTGACAATAGATTATCTGGGTCAATTccaatttccttgtcaaacTGCACCAATCTTAGAAACTTGACtttatcaaacaatttaattgGTGGGGAAATCCCAAAAGCTTTGGGGAATTTAAACAAGCTCTTGTCATTGGATCTTACCCATAATCAACTCGTTGGGTGGATTCCTGATGAATTGGGAAATGTGTGTAGCTCTCTTGTTGAACTTAGAATCCCTTTCAATAACCTCTCTGGTGCATTTCCTTCTGCTTTCTCTGCTTGTTCTTGGCTTAAAGTTATAGACTTGTCCAACAACAACATGTCAGGGTCATTGCCAGATTCTATCTTTCAGAATCTTGGATCATTAGAGGAACTGAGGTTGGGAAGCAATGCAATTTCTGggatttttccttcttcaatttcttcctgcAAGAACTTGAGGATTGTGGATTTCAGCTCCAATAAGATTTCTGGTGTTATTCCACCGGATTTATGTCCCGGAGCAGCTTCGCTAGAGGAGCTGAGAATGCCAGACAATTTGATCACAGGAAGGCTCCCAGCTGAACTGTCAAAGTGTTCAATGCTCAGGATAATTGATTTTAGTCTCAACTTTCTCAATGGGTCAATACCTGCAGAGCTTGGACAACTACAAAATCTGGAGCAACTAATAGCATGGTTCAATAGCTTGGAAGGGAAAATCCCACCAGAATTGGGCAAGTGCAGGAATCTCAAGGATCTTATACTCAATAACAATCAACTCACGGGCGAAATCCCAGTTGAGTTGTTCAATTGCACCAATCTAGAATGGATATCCTTGACAAGCAATGGATTCTCCGGTAGAATACCGCGTGAGTTCGGCCTTTTGACAAGGTTAGCAGTTCTGCAACTTGGAAATAACAGCTTAGAAGGTGAGATACCAGGAGAGTTGGCAAATTGCAGcagtttggtttggttggaCTTGAACAGCAACAAGCTCACAGGAGAGATCCCTCCAAGACTTGGCAGGCAGCAAGGAGCAAAATCATTGTATGGAATCCTCAATGGAAACACATTGGTGTTTGTAAGAAATGTTGGAAACTCTTGCAAAGGAGTTGGAGGCTTGCTAGAGTTTTCTGGTATTAGATCCGAAAGACTTCTGCAGGTGCCAACTTTAAGGACTTGTGATTTCACAAGAATGTATTCTGGCCCAGTTCTCAGCATGTTCACAAAGTATCAAACTTTGGAGTATCTTGATCTTTCTTACAACGAGCTTCGTGGGAAAATCCCGGAAGAGTTTGGAGATATGGTGGCTTTGCAGGTTCTTGAACTCTCTCACAATCAATTATCTGGAGAAATCCCTTCATCACTTGGCCAGCTTAAGAACTTGGGTGTTTTTGATGCATCACACAACAGATTGCAAGGTCATATCCCAGACTCGTTCTCAAACTTGTCATTTTTAGTCCAAATTGATCTGTCTAACAATGAGTTAACTGGGGAAATACCACCTCGCGGGCAGCTTAGCACACTTCCAGCTTCCCAATATGCAAACAACCCTGGACTTTGTGGTGTTCCATTGCCAGAATGCCCGAAAGACAGCGGCCAATCCACGAGTCCAAGTGTGGATGGTGGCAGAGAAAGCCATAGGCCAAAAACTGCATCATGGGCAAATAGCATTGTGTTGGGAATTCTCATTTCCATTGCTTCTATATGCATTTTGATTGTGTGGGCAATCGCAATGCGAGCGAGGAGGAAGGAGGCAGAGGAAGTGAAGATGCTTAATAGCTTGCAAGCAACACATGCTGCCACAACATGGAAAATTGACAAGGAAAGAGAGCCTCTAAGCATCAATGTTGCAACATTTCAGAGACAACTGAGGAAGCTCAAATTCTCACAACTAATTGAAGCAACCAATGGCTTCTCAGCAGCAAGCCTTATTGGGTGTGGTGGATTTGGAGAAGTGTTCAAAGCCACACTCAAGGATGGCTCAAGTGTTGCAATTAAGAAGCTGATCAGATTGAGCTGCCAAGGCGATAGAGAATTCATGGCCGAGATGGAAACCTTGGGAAAGatcaagcacaaaaatttAGTACCCTTGTTGGGATATTGTAAAGTGGGTGAAGAGAGGCTTCTTGTCTATGAATACATGGAGTATGGAAGCCTAGAAGAAATGCTCCATGGGAGAACAAAGACGAGAGATCGAAGAATTCTAACATgggaagaaaggaagaagattgCAAGAGGTGCTGCAAAAGGGCTATGCTTTCTCCACCACAACTGCATCCCTCACATCATTCATAGAGACATGAAATCAAGCAATGTGCTGCTAGACAACGAAATGGATGCCCGGGTTTCGGATTTTGGAATGGCAAGACTCATCAGTGCCCTTGATACCCATCTCAGCGTTAGCACACTAGCAGGAACACCTGGCTATGTGCCACCAGAATACTACCAAAGCTTCAGGTGCACTGCCAAGGGAGATGTCTATTCATTTGGAGTTGTGATGTTGGAACTTCTAACCGGCAAACGCCCTACTGATAAGGAGGATTTTGGAGACACCAACTTGGTGGGATGGGCCAAGATAAAGGTTCgcgaagagaaaaaaatggaggTGATTGACCCTGATTTGCTTCTGGTGACTAAAGGGACAGATGAAGCAGAAGCTAATGAGGTTAAAGAGATGATAAGATATTTAGAGATTACAATGCAGTGTGTTGAAGACTTTCCTTCTAAAAGGCCAAACATGTTGCAAGTAGTGAACATGCTCAGAGAGCTGATGCCTGGATCAGCTGAAGGAAGCAGCAACAGTGcttg 3395 0.4091 MENNPVQLFHHLALTLLFMITILFPATEEASVSSIRTDAEGLLAFKKMIQKDPNGILSSWKLTRNPCSWYGVSCTQGRVTQLDISENSLEGIVSLDPFASLNMLSVLKLSLNSFVVNSTSLLQLPYSLTQLDISYAGVSGPVPENLFSKCPNLLVVYLSGNNMTGPIPENFFQSAEKLQSLDLSSNNLTGSISGLKFGCNSLIDINLSDNRLSGSIPISLSNCTNLRNLTLSNNLIGGEIPKALGNLNKLLSLDLTHNQLVGWIPDELGNVCSSLVELRIPFNNLSGAFPSAFSACSWLKVIDLSNNNMSGSLPDSIFQNLGSLEELRLGSNAISGIFPSSISSCKNLRIVDFSSNKISGVIPPDLCPGAASLEELRMPDNLITGRLPAELSKCSMLRIIDFSLNFLNGSIPAELGQLQNLEQLIAWFNSLEGKIPPELGKCRNLKDLILNNNQLTGEIPVELFNCTNLEWISLTSNGFSGRIPREFGLLTRLAVLQLGNNSLEGEIPGELANCSSLVWLDLNSNKLTGEIPPRLGRQQGAKSLYGILNGNTLVFVRNVGNSCKGVGGLLEFSGIRSERLLQVPTLRTCDFTRMYSGPVLSMFTKYQTLEYLDLSYNELRGKIPEEFGDMVALQVLELSHNQLSGEIPSSLGQLKNLGVFDASHNRLQGHIPDSFSNLSFLVQIDLSNNELTGEIPPRGQLSTLPASQYANNPGLCGVPLPECPKDSGQSTSPSVDGGRESHRPKTASWANSIVLGILISIASICILIVWAIAMRARRKEAEEVKMLNSLQATHAATTWKIDKEREPLSINVATFQRQLRKLKFSQLIEATNGFSAASLIGCGGFGEVFKATLKDGSSVAIKKLIRLSCQGDREFMAEMETLGKIKHKNLVPLLGYCKVGEERLLVYEYMEYGSLEEMLHGRTKTRDRRILTWEERKKIARGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDNEMDARVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSFGVVMLELLTGKRPTDKEDFGDTNLVGWAKIKVREEKKMEVIDPDLLLVTKGTDEAEANEVKEMIRYLEITMQCVEDFPSKRPNMLQVVNMLRELMPGSAEGSSNSA 1131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01339 1131 ProSiteProfiles Leucine-rich repeat profile. 177 199 IPR001611 GO:0005515
Bva01g01339 1131 ProSitePatterns Protein kinases ATP-binding region signature. 840 863 IPR017441 GO:0005524
Bva01g01339 1131 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 23 1120 - -
Bva01g01339 1131 Gene3D Ribonuclease Inhibitor 37 148 IPR032675 -
Bva01g01339 1131 SMART serkin_6 834 1120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01339 1131 Pfam Protein kinase domain 837 1114 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01339 1131 Gene3D - 548 604 - -
Bva01g01339 1131 SUPERFAMILY Protein kinase-like (PK-like) 815 1116 IPR011009 -
Bva01g01339 1131 Pfam Brassinosteroid receptor island domain 545 604 IPR045381 -
Bva01g01339 1131 ProSiteProfiles Protein kinase domain profile. 834 1120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01339 1131 SUPERFAMILY L domain-like 37 364 - -
Bva01g01339 1131 Gene3D Transferase(Phosphotransferase) domain 1 910 1128 - -
Bva01g01339 1131 SMART LRR_typ_2 321 344 IPR003591 -
Bva01g01339 1131 SMART LRR_typ_2 247 271 IPR003591 -
Bva01g01339 1131 SMART LRR_typ_2 418 442 IPR003591 -
Bva01g01339 1131 SMART LRR_typ_2 490 514 IPR003591 -
Bva01g01339 1131 SMART LRR_typ_2 515 538 IPR003591 -
Bva01g01339 1131 SMART LRR_typ_2 678 701 IPR003591 -
Bva01g01339 1131 SMART LRR_typ_2 443 466 IPR003591 -
Bva01g01339 1131 SMART LRR_typ_2 630 654 IPR003591 -
Bva01g01339 1131 SMART LRR_typ_2 299 320 IPR003591 -
Bva01g01339 1131 Gene3D Phosphorylase Kinase; domain 1 793 909 - -
Bva01g01339 1131 Pfam Leucine rich repeat N-terminal domain 37 74 IPR013210 -
Bva01g01339 1131 Pfam Leucine rich repeat 601 643 IPR001611 GO:0005515
Bva01g01339 1131 Pfam Leucine rich repeat 177 236 IPR001611 GO:0005515
Bva01g01339 1131 Pfam Leucine rich repeat 274 334 IPR001611 GO:0005515
Bva01g01339 1131 MobiDBLite consensus disorder prediction 721 744 - -
Bva01g01339 1131 Gene3D Ribonuclease Inhibitor 173 723 IPR032675 -
Bva01g01339 1131 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 23 1120 - -
Bva01g01339 1131 SUPERFAMILY L domain-like 271 713 - -
Bva01g01339 1131 ProSitePatterns Serine/Threonine protein kinases active-site signature. 958 970 IPR008271 GO:0004672|GO:0006468
Bva01g01339 1131 PRINTS Leucine-rich repeat signature 178 191 - -
Bva01g01339 1131 PRINTS Leucine-rich repeat signature 630 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01339 Bva-Chr1 14546619 14550253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01339 42 1128 Receptor kinase-like Gene Family AT1G55610 48.625 0.0 1007
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Bva01g01339 Pkinase 1.3e-44 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01339 01 14546619 14550253 Bva01g01339 01 14546619 14550253 ECH